RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 TEKT3Q9BXF9 490 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 AP5M1Q9H0R1 490 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 CLIC4Q9Y696 253 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 SPTLC2O15270 562 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 DUSP11O75319 330 aaKnown RBP16.12■□□□□ 0.17
SKA2-205ENST00000580541 RARBP10826 455 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 CAPN2P17655 700 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 ADCYAP1R1P41586 468 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 TXKP42681 527 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 KRT76Q01546 638 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 NBR1Q14596 966 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 CELF3Q5SZQ8 465 aaKnown RBP16.12■□□□□ 0.17
SKA2-205ENST00000580541 METTL7BQ6UX53 244 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 LINC00301Q8NCQ3 95 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 ETNPPLQ8TBG4 499 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
SKA2-205ENST00000580541 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 TTC12Q9H892 705 aaPredicted RBP16.12■□□□□ 0.17
SKA2-205ENST00000580541 PDGFCQ9NRA1 345 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 RCOR1Q9UKL0 485 aa16.12■□□□□ 0.17
SKA2-205ENST00000580541 GOLGA6L22H0YM25 854 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 NOP56O00567 594 aaKnown RBP16.11■□□□□ 0.17
SKA2-205ENST00000580541 KCNA2P16389 499 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 SFNP31947 248 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 LY6KQ17RY6 165 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 ZNF746Q6NUN9 644 aaPredicted RBP16.11■□□□□ 0.17
SKA2-205ENST00000580541 C4orf32Q8N8J7 132 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 RDM1Q8NG50 284 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 ERMNQ8TAM6 284 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 EMID1Q96A84 441 aaPredicted RBP16.11■□□□□ 0.17
SKA2-205ENST00000580541 AK8Q96MA6 479 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 JPH1Q9HDC5 661 aaPredicted RBP16.11■□□□□ 0.17
SKA2-205ENST00000580541 SLC9A2Q9UBY0 812 aa16.11■□□□□ 0.17
SKA2-205ENST00000580541 DDX49Q9Y6V7 483 aaKnown RBP16.11■□□□□ 0.17
SKA2-205ENST00000580541 GOLGA6L4A6NEF3 574 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 ZEB2O60315 1214 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 PSMD10O75832 226 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 GGPS1O95749 300 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 SMPD1P17405 629 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 UBA1P22314 1058 aaKnown RBP16.1■□□□□ 0.17
SKA2-205ENST00000580541 LONP1P36776 959 aaKnown RBP16.1■□□□□ 0.17
SKA2-205ENST00000580541 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.17
SKA2-205ENST00000580541 JAK3P52333 1124 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 SEMA3FQ13275 785 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 PTPAQ15257 358 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 SMAP1Q8IYB5 467 aaPredicted RBP16.1■□□□□ 0.17
SKA2-205ENST00000580541 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
SKA2-205ENST00000580541 SH3TC2Q8TF17 1288 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 HAS1Q92839 578 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 TMEM60Q9H2L4 133 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 PKD2L1Q9P0L9 805 aa16.1■□□□□ 0.17
SKA2-205ENST00000580541 SRPRBQ9Y5M8 271 aaKnown RBP16.1■□□□□ 0.17
SKA2-205ENST00000580541 WDR64B1ANS9 1081 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 WNT7AO00755 349 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 DYNC1LI2O43237 492 aaPredicted RBP16.09■□□□□ 0.17
SKA2-205ENST00000580541 KPNA6O60684 536 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 DKC1O60832 514 aaKnown RBP eCLIP16.09■□□□□ 0.17
SKA2-205ENST00000580541 ATP9AO75110 1047 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 TECP42680 631 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 ME1P48163 572 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 CPT1AP50416 773 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 SP2Q02086 613 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 PPP2R5CQ13362 524 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 CLEC17AQ6ZS10 378 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 OR6J1Q8NGC5 347 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 SEPT1Q8WYJ6 367 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 SPATA33Q96N06 139 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 DDX20Q9UHI6 824 aaKnown RBP16.09■□□□□ 0.17
SKA2-205ENST00000580541 GNEQ9Y223 722 aaKnown RBP16.09■□□□□ 0.17
SKA2-205ENST00000580541 SAMM50Q9Y512 469 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 TCHHQ07283 1943 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 MYH15Q9Y2K3 1946 aa16.09■□□□□ 0.17
SKA2-205ENST00000580541 VWA3AA6NCI4 1184 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 DHX15O43143 795 aaKnown RBP16.08■□□□□ 0.16
SKA2-205ENST00000580541 SLC26A4O43511 780 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 CUTAO60888 179 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 PPFIA4O75335 1185 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 FARP2O94887 1054 aaPredicted RBP16.08■□□□□ 0.16
SKA2-205ENST00000580541 ARIH2O95376 493 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 PSAPP07602 524 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 MARCKSP29966 332 aaPredicted RBP16.08■□□□□ 0.16
SKA2-205ENST00000580541 CCND3P30281 292 aaPredicted RBP16.08■□□□□ 0.16
SKA2-205ENST00000580541 TXLNAP40222 546 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 TRIM32Q13049 653 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 ITGB3BPQ13352 177 aaPredicted RBP16.08■□□□□ 0.16
SKA2-205ENST00000580541 MIS18BP1Q6P0N0 1132 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 MIER3Q7Z3K6 550 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 TLK2Q86UE8 772 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
SKA2-205ENST00000580541 ARRDC4Q8NCT1 418 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 TRPV1Q8NER1 839 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 PPTC7Q8NI37 304 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 LEO1Q8WVC0 666 aaPredicted RBP16.08■□□□□ 0.16
SKA2-205ENST00000580541 ARMC5Q96C12 935 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 RNF208Q9H0X6 261 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 LRWD1Q9UFC0 647 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 PCDHA10Q9Y5I2 948 aa16.08■□□□□ 0.16
SKA2-205ENST00000580541 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms