RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 PRPF40BQ6NWY9 871 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 C1orf228Q6PIY5 440 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 C1orf122Q6ZSJ8 110 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 SYNPOQ8N3V7 929 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 UHMK1Q8TAS1 419 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 NEK1Q96PY6 1258 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 CAMKK2Q96RR4 588 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 FAM129BQ96TA1 746 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 CENPOQ9BU64 300 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 MAK16Q9BXY0 300 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 OSBPL5Q9H0X9 879 aaPredicted RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 MKNK2Q9HBH9 465 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 SMYD2Q9NRG4 433 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 SMC4Q9NTJ3 1288 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 MRGBPQ9NV56 204 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 ARGLU1Q9NWB6 273 aaPredicted RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 TMOD4Q9NZQ9 345 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 CLIP2Q9UDT6 1046 aa7.44□□□□□ -1.22
COPS3-216ENST00000579716 DDX49Q9Y6V7 483 aaKnown RBP7.44□□□□□ -1.22
COPS3-216ENST00000579716 RBAK-RBAKDNI3L0D1 243 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 STXBP3O00186 592 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 INMTO95050 263 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 RAD52P43351 418 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 LMNB2Q03252 620 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 DSC3Q14574 896 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 ELF2Q15723 593 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 IFI16Q16666 785 aaKnown RBP7.43□□□□□ -1.22
COPS3-216ENST00000579716 RPS26P11Q5JNZ5 115 aaPredicted RBP7.43□□□□□ -1.22
COPS3-216ENST00000579716 METTL24Q5JXM2 366 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 CFAP58Q5T655 872 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 LRCH2Q5VUJ6 765 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 WWC2Q6AWC2 1192 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 PLBD1Q6P4A8 553 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 DZIP1Q86YF9 867 aaKnown RBP7.43□□□□□ -1.22
COPS3-216ENST00000579716 PASD1Q8IV76 773 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 MSANTD4Q8NCY6 345 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 RSAD2Q8WXG1 361 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 HIC2Q96JB3 615 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 ZMAT2Q96NC0 199 aaKnown RBP7.43□□□□□ -1.22
COPS3-216ENST00000579716 CAAP1Q9H8G2 361 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 PRDM11Q9NQV5 511 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 PIH1D1Q9NWS0 290 aaKnown RBP7.43□□□□□ -1.22
COPS3-216ENST00000579716 KCTD5Q9NXV2 234 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 OBP2AQ9NY56 170 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 GGT7Q9UJ14 662 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 ATP6V0A2Q9Y487 856 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 SQORQ9Y6N5 450 aa7.43□□□□□ -1.22
COPS3-216ENST00000579716 C2orf81A6NN90 581 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 PHKG2P15735 406 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 SERPINB3P29508 390 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 SOX5P35711 763 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 STAT3P40763 770 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 HSD17B7P56937 341 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 TMF1P82094 1093 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 APOBRQ0VD83 1088 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 SQSTM1Q13501 440 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 EIF4A2Q14240 407 aaKnown RBP7.42□□□□□ -1.22
COPS3-216ENST00000579716 MEX3CQ5U5Q3 659 aaKnown RBP7.42□□□□□ -1.22
COPS3-216ENST00000579716 EP400NLQ6ZTU2 488 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 CDC37L1Q7L3B6 337 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 RTL10Q7L3V2 364 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 BEND5Q7L4P6 421 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 C1QL4Q86Z23 238 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 TAB3Q8N5C8 712 aaPredicted RBP7.42□□□□□ -1.22
COPS3-216ENST00000579716 KCT2Q8NC54 265 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 NAXEQ8NCW5 288 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 IL17REQ8NFR9 667 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 NEK9Q8TD19 979 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 RASGRP4Q8TDF6 673 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 ISL2Q96A47 359 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 CCDC74AQ96AQ1 378 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 PPM1MQ96MI6 270 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 TCHPQ9BT92 498 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 ASPSCR1Q9BZE9 553 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 TRPV5Q9NQA5 729 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 DDX21Q9NR30 783 aaKnown RBP eCLIP7.42□□□□□ -1.22
COPS3-216ENST00000579716 AASDHPPTQ9NRN7 309 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 HELLSQ9NRZ9 838 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 SEPT10Q9P0V9 454 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 DKK3Q9UBP4 350 aa7.42□□□□□ -1.22
COPS3-216ENST00000579716 SETD1BQ9UPS6 1966 aaKnown RBP7.42□□□□□ -1.22
COPS3-216ENST00000579716 MUSKO15146 869 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 CEACAM5P06731 702 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 GSTP1P09211 210 aaKnown RBP7.41□□□□□ -1.22
COPS3-216ENST00000579716 KRT10P13645 584 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 KRT13P13646 458 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 KRT20P35900 424 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 ETFBP38117 255 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 INHBEP58166 350 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 ZNF280AP59817 542 aaPredicted RBP7.41□□□□□ -1.22
COPS3-216ENST00000579716 MECOMQ03112 1051 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 ZBTB17Q13105 803 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 GRM2Q14416 872 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 PSMD6Q15008 389 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 TAF7Q15545 349 aaPredicted RBP7.41□□□□□ -1.22
COPS3-216ENST00000579716 PKN2Q16513 984 aaKnown RBP7.41□□□□□ -1.22
COPS3-216ENST00000579716 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.41□□□□□ -1.22
COPS3-216ENST00000579716 USP51Q70EK9 711 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 BRINP3Q76B58 766 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms