RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 C17orf102A2RUQ5 167 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 PRC1O43663 620 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 GTPBP6O43824 516 aaPredicted RBP10.32□□□□□ -0.76
GGA3-207ENST00000578896 LPXNO60711 386 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 BAIAP3O94812 1187 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 LGALS2P05162 132 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 CTSHP09668 335 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 SMIM10L2AP0DMW4 78 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 SMIM10L2BP0DMW5 78 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 RBL2Q08999 1139 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 SART3Q15020 963 aaKnown RBP10.32□□□□□ -0.76
GGA3-207ENST00000578896 KCNV1Q6PIU1 500 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 NFXL1Q6ZNB6 911 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 SRBD1Q8N5C6 995 aaKnown RBP10.32□□□□□ -0.76
GGA3-207ENST00000578896 DBF4BQ8NFT6 615 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 ATP6V0A1Q93050 837 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 UHRF1Q96T88 793 aaPredicted RBP10.32□□□□□ -0.76
GGA3-207ENST00000578896 LSG1Q9H089 658 aaKnown RBP10.32□□□□□ -0.76
GGA3-207ENST00000578896 RNPEPQ9H4A4 650 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 SETD4Q9NVD3 440 aa10.32□□□□□ -0.76
GGA3-207ENST00000578896 RSPH10B2B2RC85 870 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 SPATA31C2B4DYI2 1134 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 H3BRB1 525 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 NOP56O00567 594 aaKnown RBP10.31□□□□□ -0.76
GGA3-207ENST00000578896 SH2B2O14492 632 aaPredicted RBP10.31□□□□□ -0.76
GGA3-207ENST00000578896 MEIS2O14770 477 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 SLC27A2O14975 620 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 LGR5O75473 907 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 RSPH10BP0C881 870 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 BMP1P13497 986 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 IKBKEQ14164 716 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 UBE2SQ16763 222 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 CASC1Q6TDU7 716 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 SERINC5Q86VE9 423 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 CTCFLQ8NI51 663 aaPredicted RBP10.31□□□□□ -0.76
GGA3-207ENST00000578896 SMARCC2Q8TAQ2 1214 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 RRP36Q96EU6 259 aaKnown RBP10.31□□□□□ -0.76
GGA3-207ENST00000578896 GPR20Q99678 358 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 TUT1Q9H6E5 874 aaKnown RBP10.31□□□□□ -0.76
GGA3-207ENST00000578896 PKD2L1Q9P0L9 805 aa10.31□□□□□ -0.76
GGA3-207ENST00000578896 ABHD14A-ACY1A0A1B0GW23 586 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 LINC01553A4QN01 128 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 ATP9AO75110 1047 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 GJB5O95377 273 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 TGFB3P10600 412 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 ICAM3P32942 547 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 GNPTABQ3T906 1256 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 CREB3L3Q68CJ9 461 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 MYOCDQ8IZQ8 938 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 SAMD3Q8N6K7 520 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 ZBTB10Q96DT7 871 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 TCEANC2Q96MN5 208 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 INPP4AQ96PE3 977 aaPredicted RBP10.3□□□□□ -0.76
GGA3-207ENST00000578896 RAD9AQ99638 391 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 ESYT1Q9BSJ8 1104 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
GGA3-207ENST00000578896 SUGCTQ9HAC7 445 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 COL4A4P53420 1690 aaPredicted RBP10.3□□□□□ -0.76
GGA3-207ENST00000578896 FRMPD4Q14CM0 1322 aa10.3□□□□□ -0.76
GGA3-207ENST00000578896 CCDC69A6NI79 296 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 FIBPO43427 364 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 DDAH1O94760 285 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 UPP2O95045 317 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 POU3F3P20264 500 aaPredicted RBP10.29□□□□□ -0.76
GGA3-207ENST00000578896 MCM5P33992 734 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 ARHGAP4P98171 946 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 TRAF1Q13077 416 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 NEDD9Q14511 834 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 METTL7BQ6UX53 244 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 CUL5Q93034 780 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 C17orf80Q9BSJ5 609 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
GGA3-207ENST00000578896 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
GGA3-207ENST00000578896 PARNO95453 639 aaKnown RBP10.28□□□□□ -0.76
GGA3-207ENST00000578896 ITGB5P18084 799 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 MARK3P27448 753 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 HOXC8P31273 242 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 KIF5BP33176 963 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 ERVK-21P61565 698 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 PLEKHG4Q58EX7 1191 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 PCNX4Q63HM2 1172 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 RUFY4Q6ZNE9 571 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 LMBR1Q8WVP7 490 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 PGBD1Q96JS3 809 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 TGS1Q96RS0 853 aaKnown RBP10.28□□□□□ -0.76
GGA3-207ENST00000578896 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 PSTPIP2Q9H939 334 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 ANO2Q9NQ90 1003 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 LOXHD1Q8IVV2 1947 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 SIP14410 1827 aa10.28□□□□□ -0.76
GGA3-207ENST00000578896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.27□□□□□ -0.77
GGA3-207ENST00000578896 GSTTP1A0A1W2PQM5 241 aa10.27□□□□□ -0.77
GGA3-207ENST00000578896 PIK3CDO00329 1044 aa10.27□□□□□ -0.77
GGA3-207ENST00000578896 AMHP03971 560 aa10.27□□□□□ -0.77
GGA3-207ENST00000578896 KCNA2P16389 499 aa10.27□□□□□ -0.77
GGA3-207ENST00000578896 COL9A1P20849 921 aa10.27□□□□□ -0.77
GGA3-207ENST00000578896 TCF7P36402 384 aaPredicted RBP10.27□□□□□ -0.77
GGA3-207ENST00000578896 MKRN4PQ13434 485 aaPredicted RBP10.27□□□□□ -0.77
GGA3-207ENST00000578896 NECTIN1Q15223 517 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms