RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 RFC2P35250 354 aa26.32■■□□□ 1.8
VAPA-205ENST00000578314 GIMAP8Q8ND71 665 aaPredicted RBP26.32■■□□□ 1.8
VAPA-205ENST00000578314 CAGE1Q8TC20 777 aa26.32■■□□□ 1.8
VAPA-205ENST00000578314 MTIF3Q9H2K0 278 aaKnown RBP26.32■■□□□ 1.8
VAPA-205ENST00000578314 TTYH1Q9H313 450 aaPredicted RBP26.32■■□□□ 1.8
VAPA-205ENST00000578314 EHMT1Q9H9B1 1298 aa26.32■■□□□ 1.8
VAPA-205ENST00000578314 NOP56O00567 594 aaKnown RBP26.31■■□□□ 1.8
VAPA-205ENST00000578314 MAFGO15525 162 aa26.31■■□□□ 1.8
VAPA-205ENST00000578314 PRPF3O43395 683 aaKnown RBP26.31■■□□□ 1.8
VAPA-205ENST00000578314 LGALS2P05162 132 aa26.31■■□□□ 1.8
VAPA-205ENST00000578314 PDIA3P30101 505 aaKnown RBP26.31■■□□□ 1.8
VAPA-205ENST00000578314 CCDC155Q8N6L0 562 aa26.31■■□□□ 1.8
VAPA-205ENST00000578314 DHX38Q92620 1227 aaKnown RBP26.31■■□□□ 1.8
VAPA-205ENST00000578314 CDX2Q99626 313 aaPredicted RBP26.31■■□□□ 1.8
VAPA-205ENST00000578314 JADE2Q9NQC1 790 aa26.31■■□□□ 1.8
VAPA-205ENST00000578314 CXXC1Q9P0U4 656 aaPredicted RBP26.31■■□□□ 1.8
VAPA-205ENST00000578314 CYP46A1Q9Y6A2 500 aa26.31■■□□□ 1.8
VAPA-205ENST00000578314 TMEM265A0A087WTH1 108 aa26.3■■□□□ 1.8
VAPA-205ENST00000578314 H3BRB1 525 aa26.3■■□□□ 1.8
VAPA-205ENST00000578314 ATP9AO75110 1047 aa26.3■■□□□ 1.8
VAPA-205ENST00000578314 SCG2P13521 617 aa26.3■■□□□ 1.8
VAPA-205ENST00000578314 KCNA2P16389 499 aa26.3■■□□□ 1.8
VAPA-205ENST00000578314 RBL2Q08999 1139 aa26.3■■□□□ 1.8
VAPA-205ENST00000578314 TOB2Q14106 344 aaPredicted RBP26.3■■□□□ 1.8
VAPA-205ENST00000578314 NTRK3Q16288 839 aa26.3■■□□□ 1.8
VAPA-205ENST00000578314 OTOP2Q7RTS6 562 aa26.3■■□□□ 1.8
VAPA-205ENST00000578314 TUT1Q9H6E5 874 aaKnown RBP26.3■■□□□ 1.8
VAPA-205ENST00000578314 CLK2P49760 499 aaKnown RBP26.29■■□□□ 1.8
VAPA-205ENST00000578314 PTK7Q13308 1070 aa26.29■■□□□ 1.8
VAPA-205ENST00000578314 MTMR1Q13613 665 aa26.29■■□□□ 1.8
VAPA-205ENST00000578314 PKN1Q16512 942 aa26.29■■□□□ 1.8
VAPA-205ENST00000578314 AFAP1L1Q8TED9 768 aa26.29■■□□□ 1.8
VAPA-205ENST00000578314 TELO2Q9Y4R8 837 aa26.29■■□□□ 1.8
VAPA-205ENST00000578314 CDH23Q9H251 3354 aa26.28■■□□□ 1.8
VAPA-205ENST00000578314 IFNAR1P17181 557 aa26.28■■□□□ 1.8
VAPA-205ENST00000578314 HOXC8P31273 242 aa26.28■■□□□ 1.8
VAPA-205ENST00000578314 AP3B2Q13367 1082 aa26.28■■□□□ 1.8
VAPA-205ENST00000578314 HIC1Q14526 733 aa26.28■■□□□ 1.8
VAPA-205ENST00000578314 UNC80Q8N2C7 3258 aa26.27■■□□□ 1.8
VAPA-205ENST00000578314 ESYT2A0FGR8 921 aa26.27■■□□□ 1.8
VAPA-205ENST00000578314 GRXCR1A8MXD5 290 aa26.27■■□□□ 1.8
VAPA-205ENST00000578314 DNAJB2P25686 324 aa26.27■■□□□ 1.8
VAPA-205ENST00000578314 ZNF200P98182 395 aaPredicted RBP26.27■■□□□ 1.8
VAPA-205ENST00000578314 DEFB128Q7Z7B8 93 aa26.27■■□□□ 1.8
VAPA-205ENST00000578314 MXRA8Q9BRK3 442 aa26.27■■□□□ 1.8
VAPA-205ENST00000578314 ANO3Q9BYT9 981 aa26.27■■□□□ 1.8
VAPA-205ENST00000578314 ZMYND12Q9H0C1 365 aa26.27■■□□□ 1.8
VAPA-205ENST00000578314 MYH7BA7E2Y1 1941 aa26.26■■□□□ 1.79
VAPA-205ENST00000578314 SELPP16109 830 aa26.26■■□□□ 1.79
VAPA-205ENST00000578314 TRIM71Q2Q1W2 868 aaKnown RBP26.26■■□□□ 1.79
VAPA-205ENST00000578314 PHKBQ93100 1093 aa26.26■■□□□ 1.79
VAPA-205ENST00000578314 ZNF274Q96GC6 653 aaPredicted RBP26.26■■□□□ 1.79
VAPA-205ENST00000578314 PGBD1Q96JS3 809 aa26.26■■□□□ 1.79
VAPA-205ENST00000578314 RNF26Q9BY78 433 aaPredicted RBP26.26■■□□□ 1.79
VAPA-205ENST00000578314 TMEM260Q9NX78 707 aa26.26■■□□□ 1.79
VAPA-205ENST00000578314 EYSQ5T1H1 3165 aa26.26■■□□□ 1.79
VAPA-205ENST00000578314 PARNO95453 639 aaKnown RBP26.25■■□□□ 1.79
VAPA-205ENST00000578314 CKBP12277 381 aa26.25■■□□□ 1.79
VAPA-205ENST00000578314 SREBF1P36956 1147 aa26.25■■□□□ 1.79
VAPA-205ENST00000578314 GPNMBQ14956 572 aa26.25■■□□□ 1.79
VAPA-205ENST00000578314 CYP2W1Q8TAV3 490 aa26.25■■□□□ 1.79
VAPA-205ENST00000578314 CCDC12Q8WUD4 166 aaPredicted RBP26.25■■□□□ 1.79
VAPA-205ENST00000578314 PBX4Q9BYU1 374 aa26.25■■□□□ 1.79
VAPA-205ENST00000578314 UPF3BQ9BZI7 483 aaKnown RBP26.25■■□□□ 1.79
VAPA-205ENST00000578314 KCNH7Q9NS40 1196 aa26.25■■□□□ 1.79
VAPA-205ENST00000578314 C17orf102A2RUQ5 167 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 DLL1O00548 723 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 SMIM10L2AP0DMW4 78 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 SMIM10L2BP0DMW5 78 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 ACTN1P12814 892 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 CCT2P78371 535 aaKnown RBP26.24■■□□□ 1.79
VAPA-205ENST00000578314 AKAP17AQ02040 695 aaKnown RBP26.24■■□□□ 1.79
VAPA-205ENST00000578314 SP4Q02446 784 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 CEP55Q53EZ4 464 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 MCTP2Q6DN12 878 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 LRRC8DQ7L1W4 858 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 SERINC5Q86VE9 423 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 MYLIPQ8WY64 445 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 SEPT1Q8WYJ6 367 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 TIFAQ96CG3 184 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 RNPEPQ9H4A4 650 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 NCOA5Q9HCD5 579 aaKnown RBP26.24■■□□□ 1.79
VAPA-205ENST00000578314 C6orf50Q9HD87 102 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 ZNF215Q9UL58 517 aaPredicted RBP26.24■■□□□ 1.79
VAPA-205ENST00000578314 SLC4A7Q9Y6M7 1214 aa26.24■■□□□ 1.79
VAPA-205ENST00000578314 GSTTP1A0A1W2PQM5 241 aa26.23■■□□□ 1.79
VAPA-205ENST00000578314 MEIS1O00470 390 aa26.23■■□□□ 1.79
VAPA-205ENST00000578314 PBX2P40425 430 aa26.23■■□□□ 1.79
VAPA-205ENST00000578314 UTP14CQ5TAP6 766 aaKnown RBP26.23■■□□□ 1.79
VAPA-205ENST00000578314 TRAF7Q6Q0C0 670 aa26.23■■□□□ 1.79
VAPA-205ENST00000578314 TRIM50Q86XT4 487 aa26.23■■□□□ 1.79
VAPA-205ENST00000578314 WNT8BQ93098 351 aa26.23■■□□□ 1.79
VAPA-205ENST00000578314 SLC26A6Q9BXS9 759 aa26.23■■□□□ 1.79
VAPA-205ENST00000578314 PDRG1Q9NUG6 133 aa26.23■■□□□ 1.79
VAPA-205ENST00000578314 TCF7P36402 384 aaPredicted RBP26.22■■□□□ 1.79
VAPA-205ENST00000578314 RAB30Q15771 203 aa26.22■■□□□ 1.79
VAPA-205ENST00000578314 JAKMIP3Q5VZ66 844 aa26.22■■□□□ 1.79
VAPA-205ENST00000578314 CRYGNQ8WXF5 182 aa26.22■■□□□ 1.79
VAPA-205ENST00000578314 ATP6V0A1Q93050 837 aa26.22■■□□□ 1.79
VAPA-205ENST00000578314 FTOQ9C0B1 505 aaKnown RBP eCLIP26.22■■□□□ 1.792e-7■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms