RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 LCHNA4D1U4 455 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 C5orf67F2Z3F1 127 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 H3BNC9 293 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 ZNF286BP0CG31 522 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 MYCLP12524 364 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 GNAQP50148 359 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 MBTPS1Q14703 1052 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 TAF2Q6P1X5 1199 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 NLRX1Q86UT6 975 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 NEK9Q8TD19 979 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 GDPD5Q8WTR4 605 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 CPVLQ9H3G5 476 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 PRR33A8MZF0 331 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 DDAH1O94760 285 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 SMIM10L2AP0DMW4 78 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 SMIM10L2BP0DMW5 78 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 PDIA4P13667 645 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 THPOP40225 353 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 PCNX4Q63HM2 1172 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 TNPO1Q92973 898 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 CUL5Q93034 780 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
SMARCE1-214ENST00000578112 NRCAMQ92823 1304 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 NLRC5Q86WI3 1866 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 MAFGO15525 162 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 PPP1R11O60927 126 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 HSDL1Q3SXM5 330 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 NAALADL2Q58DX5 795 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 STAG2Q8N3U4 1231 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 DBF4BQ8NFT6 615 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 NCOA7Q8NI08 942 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 GPRASP2Q96D09 838 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 PABPC5Q96DU9 382 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 KIF5BP33176 963 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 ADAM17P78536 824 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 TCTN1Q2MV58 587 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 RSPH3Q86UC2 560 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 FAM178BQ8IXR5 827 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 NECAB3Q96P71 396 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 GPR20Q99678 358 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 PLVAPQ9BX97 442 aa12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 NSUN3Q9H649 340 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-214ENST00000578112 TCF20Q9UGU0 1960 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-214ENST00000578112 GRXCR2A6NFK2 248 aa12.97□□□□□ -0.33
SMARCE1-214ENST00000578112 CHMP4BP1P59074 171 aa12.97□□□□□ -0.33
SMARCE1-214ENST00000578112 WTAPQ15007 396 aa12.97□□□□□ -0.33
SMARCE1-214ENST00000578112 RALYLQ86SE5 291 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-214ENST00000578112 TMTC2Q8N394 836 aa12.97□□□□□ -0.33
SMARCE1-214ENST00000578112 TROAPQ12815 778 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 WNT8BQ93098 351 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 FSD2A1L4K1 749 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 SP2Q02086 613 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.96□□□□□ -0.332e-7■■□□□ 13.5
SMARCE1-214ENST00000578112 TMEM192Q8IY95 271 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 PIGSQ96S52 555 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 YME1L1Q96TA2 773 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 EHMT1Q9H9B1 1298 aa12.96□□□□□ -0.33
SMARCE1-214ENST00000578112 CALM1P0DP23 149 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 CALM2P0DP24 149 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 CALM3P0DP25 149 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 GPM6BQ13491 265 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 GJD3Q8N144 294 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 RRP36Q96EU6 259 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 C11orf84Q9BUA3 381 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 RRN3P2A6NIE6 340 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 MRPS9P82933 396 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 HIC1Q14526 733 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 KRT40Q6A162 431 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 BANK1Q8NDB2 785 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 IL31RAQ8NI17 732 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 POP1Q99575 1024 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
SMARCE1-214ENST00000578112 HOXA13P31271 388 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 PTCRAQ6ISU1 281 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 MYOCDQ8IZQ8 938 aa12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 FIBCD1Q8N539 461 aa12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 CTCFLQ8NI51 663 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 SMARCC2Q8TAQ2 1214 aa12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 P2RX5Q93086 422 aa12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 SEC63Q9UGP8 760 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 MBLAC1A4D2B0 266 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 TREHO43280 583 aa12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 MGAT3Q09327 533 aa12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 PPP1R13LQ8WUF5 828 aa12.94□□□□□ -0.34
SMARCE1-214ENST00000578112 CLP1Q92989 425 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms