RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 TUT1Q9H6E5 874 aaKnown RBP4.79□□□□□ -1.64
PTPRM-206ENST00000578093 ANO2Q9NQ90 1003 aa4.79□□□□□ -1.64
PTPRM-206ENST00000578093 XPNPEP3Q9NQH7 507 aa4.79□□□□□ -1.64
PTPRM-206ENST00000578093 PCDHGC4Q9Y5F7 938 aa4.79□□□□□ -1.64
PTPRM-206ENST00000578093 C5orf42Q9H799 3197 aa4.79□□□□□ -1.64
PTPRM-206ENST00000578093 ARID1BQ8NFD5 2236 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 UMODL1Q5DID0 1318 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 TMEM265A0A087WTH1 108 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 TCRBV5S4A2TA0A5A2 114 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 PRKAB2O43741 272 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 FLOT1O75955 427 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 CT47B1P0C2W7 299 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 ZNF865P0CJ78 1059 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 AKR1B1P15121 316 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 RAG1P15918 1043 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 NPR3P17342 541 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 PTGS1P23219 599 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 FPGSQ05932 587 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 OS9Q13438 667 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 COG2Q14746 738 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 CCSAPQ6IQ19 270 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 ATF7IPQ6VMQ6 1270 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 C16orf59Q7L2K0 433 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 BTLAQ7Z6A9 289 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 TREML1Q86YW5 311 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 REPS2Q8NFH8 660 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 NANOS1Q8WY41 292 aaKnown RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 FRAT1Q92837 279 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 TIFAQ96CG3 184 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 HSH2DQ96JZ2 352 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 FGD4Q96M96 766 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 PBX4Q9BYU1 374 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 ZCCHC2Q9C0B9 1178 aaKnown RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 PRDM12Q9H4Q4 367 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 ZNF576Q9H609 170 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 TMEM39AQ9NV64 488 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 TBX21Q9UL17 535 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 ZNF214Q9UL59 606 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 PRRC2BQ5JSZ5 2229 aaKnown RBP4.78□□□□□ -1.64
PTPRM-206ENST00000578093 ATG2AQ2TAZ0 1938 aa4.78□□□□□ -1.64
PTPRM-206ENST00000578093 TRIOO75962 3097 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 BRWD1Q9NSI6 2320 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 TNFRSF10BO14763 440 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 KHNYNO15037 678 aaKnown RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 SURF6O75683 361 aaKnown RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 MICAL2O94851 1124 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 POLR3DP05423 398 aaPredicted RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 FAM157BP0CG42 384 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ACRP10323 421 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 RARBP10826 455 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 RLBP1P12271 317 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 PDE6AP16499 860 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 PCSK2P16519 638 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 MPSTP25325 297 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 EIF1AXP47813 144 aaKnown RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 IDH3AP50213 366 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ARSDP51689 593 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ACLYP53396 1101 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ICA1Q05084 483 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ZNF792Q3KQV3 632 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 TMEM240Q5SV17 173 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 RASIP1Q5U651 963 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ANKRD33Q7Z3H0 272 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 RNF180Q86T96 592 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 TTC6Q86TZ1 520 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ABRAQ8N0Z2 381 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 VWA5B2Q8N398 1253 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 TTC16Q8NEE8 873 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 KLHDC9Q8NEP7 349 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 TET1Q8NFU7 2136 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 WHAMMQ8TF30 809 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ARHGAP45Q92619 1136 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ZNF837Q96EG3 531 aaPredicted RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 MMP19Q99542 508 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 NUP88Q99567 741 aaPredicted RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 TINF2Q9BSI4 451 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 GZF1Q9H116 711 aaPredicted RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 MROH8Q9H579 483 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 VCPKMTQ9H867 229 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ARMT1Q9H993 441 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 CABP5Q9NP86 173 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 DCP1AQ9NPI6 582 aaPredicted RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 STARD7Q9NQZ5 370 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 CUEDC1Q9NWM3 386 aaPredicted RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 MCM9Q9NXL9 1143 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 THEGQ9P2T0 379 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ATXN7L1Q9ULK2 861 aaPredicted RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 HDAC5Q9UQL6 1122 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 EXOC6BQ9Y2D4 811 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 YBX2Q9Y2T7 364 aaKnown RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 NOP58Q9Y2X3 529 aaKnown RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 TMX2Q9Y320 296 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 TACC3Q9Y6A5 838 aa4.77□□□□□ -1.65
PTPRM-206ENST00000578093 DDX49Q9Y6V7 483 aaKnown RBP4.77□□□□□ -1.65
PTPRM-206ENST00000578093 ASTN1O14525 1302 aa4.76□□□□□ -1.65
PTPRM-206ENST00000578093 ZNF532Q9HCE3 1301 aa4.76□□□□□ -1.65
PTPRM-206ENST00000578093 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.76□□□□□ -1.65
PTPRM-206ENST00000578093 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.76□□□□□ -1.65
PTPRM-206ENST00000578093 WDR46O15213 610 aaKnown RBP4.76□□□□□ -1.65
PTPRM-206ENST00000578093 CTAGE5O15320 804 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms