RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PCDHA1Q9Y5I3 950 aa18.47■□□□□ 0.55
VAPA-204ENST00000577901 PNMA6FA0A0J9YX94 578 aa18.46■□□□□ 0.55
VAPA-204ENST00000577901 HAS3O00219 553 aa18.46■□□□□ 0.55
VAPA-204ENST00000577901 CYTH3O43739 400 aa18.46■□□□□ 0.55
VAPA-204ENST00000577901 PTK7Q13308 1070 aa18.46■□□□□ 0.55
VAPA-204ENST00000577901 PIGSQ96S52 555 aa18.46■□□□□ 0.55
VAPA-204ENST00000577901 KIAA1217Q5T5P2 1943 aa18.46■□□□□ 0.55
VAPA-204ENST00000577901 ABHD14A-ACY1A0A1B0GW23 586 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 LPXNO60711 386 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 MYCLP12524 364 aaPredicted RBP18.45■□□□□ 0.54
VAPA-204ENST00000577901 RXRAP19793 462 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 GHRHRQ02643 423 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 TCTN1Q2MV58 587 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 MICU3Q86XE3 530 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 TET1Q8NFU7 2136 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 HLA-CQ95604 372 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 RRP36Q96EU6 259 aaKnown RBP18.45■□□□□ 0.54
VAPA-204ENST00000577901 RAD9AQ99638 391 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 PDCD2LQ9BRP1 358 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 SPZ1Q9BXG8 430 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 MAP3K20Q9NYL2 800 aaKnown RBP18.45■□□□□ 0.54
VAPA-204ENST00000577901 PTPRSQ13332 1948 aa18.45■□□□□ 0.54
VAPA-204ENST00000577901 ZBTB43O43298 467 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 PPP1R11O60927 126 aaPredicted RBP18.44■□□□□ 0.54
VAPA-204ENST00000577901 PPFIA4O75335 1185 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 RGS20O76081 388 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 GJB5O95377 273 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 RPS6KB1P23443 525 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 IKBKEQ14164 716 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 TRIM71Q2Q1W2 868 aaKnown RBP18.44■□□□□ 0.54
VAPA-204ENST00000577901 ZNF618Q5T7W0 954 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 MYSM1Q5VVJ2 828 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 TRAF7Q6Q0C0 670 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 APOA5Q6Q788 366 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 Q6ZUG5 572 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 WNT8BQ93098 351 aa18.44■□□□□ 0.54
VAPA-204ENST00000577901 RBM28Q9NW13 759 aaKnown RBP18.44■□□□□ 0.54
VAPA-204ENST00000577901 SEC63Q9UGP8 760 aaKnown RBP18.44■□□□□ 0.54
VAPA-204ENST00000577901 TCF20Q9UGU0 1960 aaKnown RBP18.44■□□□□ 0.54
VAPA-204ENST00000577901 PRRC2BQ5JSZ5 2229 aaKnown RBP18.43■□□□□ 0.54
VAPA-204ENST00000577901 TRIP12Q14669 1992 aaPredicted RBP18.43■□□□□ 0.54
VAPA-204ENST00000577901 KLF18A0A0U1RQI7 1052 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 SORBS3O60504 671 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 EFCAB14O75071 495 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 HOXD8P13378 290 aaPredicted RBP18.43■□□□□ 0.54
VAPA-204ENST00000577901 CPA1P15085 419 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
VAPA-204ENST00000577901 SLC35G1Q2M3R5 365 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 HSDL1Q3SXM5 330 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 CELF3Q5SZQ8 465 aaKnown RBP18.43■□□□□ 0.54
VAPA-204ENST00000577901 KCNV1Q6PIU1 500 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 VSIG10LQ86VR7 867 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 RAB11FIP4Q86YS3 637 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 SRBD1Q8N5C6 995 aaKnown RBP18.43■□□□□ 0.54
VAPA-204ENST00000577901 SAMD3Q8N6K7 520 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 GDPD5Q8WTR4 605 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 PIBF1Q8WXW3 757 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 SPATA33Q96N06 139 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 C1QTNF1Q9BXJ1 281 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 LMCD1Q9NZU5 365 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 MTUS1Q9ULD2 1270 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
VAPA-204ENST00000577901 NAP1L2Q9ULW6 460 aaPredicted RBP18.43■□□□□ 0.54
VAPA-204ENST00000577901 COL4A4P53420 1690 aaPredicted RBP18.43■□□□□ 0.54
VAPA-204ENST00000577901 PLEKHA8P1O95397 391 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 GGPS1O95749 300 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 HOXA13P31271 388 aaPredicted RBP18.42■□□□□ 0.54
VAPA-204ENST00000577901 HIC1Q14526 733 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 MBTPS1Q14703 1052 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 PGM5Q15124 567 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 RTN1Q16799 776 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 FBXL16Q8N461 479 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 IL31RAQ8NI17 732 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 TM6SF1Q9BZW5 370 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 ZSWIM6Q9HCJ5 1215 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 CYP46A1Q9Y6A2 500 aa18.42■□□□□ 0.54
VAPA-204ENST00000577901 RBAK-RBAKDNI3L0D1 243 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 LGR5O75473 907 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 RCAN1P53805 252 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 ERVK-21P61565 698 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 SP2Q02086 613 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 FAM117BQ6P1L5 589 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 TMTC3Q6ZXV5 915 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 CMTR1Q8N1G2 835 aaKnown RBP18.41■□□□□ 0.54
VAPA-204ENST00000577901 BRF1Q92994 677 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 TGS1Q96RS0 853 aaKnown RBP18.41■□□□□ 0.54
VAPA-204ENST00000577901 SUGCTQ9HAC7 445 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 MYH6P13533 1939 aa18.41■□□□□ 0.54
VAPA-204ENST00000577901 CCDC196A0A1B0GTZ2 297 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 LINC01553A4QN01 128 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 GOLGA8AA7E2F4 631 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 GOLGA8BA8MQT2 603 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
VAPA-204ENST00000577901 POLR2MP0CAP2 368 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 TGFB3P10600 412 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 UBA1P22314 1058 aaKnown RBP18.4■□□□□ 0.54
VAPA-204ENST00000577901 CCND2P30279 289 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 THPOP40225 353 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms