RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 SMARCC2Q8TAQ2 1214 aa16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 MRPL38Q96DV4 380 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 RRP36Q96EU6 259 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 CDHR1Q96JP9 859 aa16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 MYH6P13533 1939 aa16.4■□□□□ 0.22
SMARCD2-205ENST00000577686 IGHDP01880 384 aa16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 GNAQP50148 359 aa16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 HTRA4P83105 476 aaPredicted RBP16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 MBTPS1Q14703 1052 aa16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 LEXMQ3ZCV2 418 aa16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 IL31RAQ8NI17 732 aa16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 LZTS2Q9BRK4 669 aa16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 RWDD3Q9Y3V2 267 aa16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 PRRC2BQ5JSZ5 2229 aaKnown RBP16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 FRMPD4Q14CM0 1322 aa16.39■□□□□ 0.21
SMARCD2-205ENST00000577686 RPLP2P05387 115 aaKnown RBP16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 HOXC8P31273 242 aa16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 SP2Q02086 613 aa16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 TTC22Q5TAA0 569 aa16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 WNT8BQ93098 351 aa16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 MAP3K14Q99558 947 aa16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 IFIH1Q9BYX4 1025 aaKnown RBP16.38■□□□□ 0.21
SMARCD2-205ENST00000577686 CHD7Q9P2D1 2997 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 SPATA31C2B4DYI2 1134 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 TREHO43280 583 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 NCK2O43639 380 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 DDAH1O94760 285 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 CYP21A2P08686 494 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 CTSHP09668 335 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 KCNA5P22460 613 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 PCNX4Q63HM2 1172 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 TAF2Q6P1X5 1199 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 SPRED2Q7Z698 418 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 C17orf80Q9BSJ5 609 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 SPZ1Q9BXG8 430 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 RNPEPQ9H4A4 650 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 NRCAMQ92823 1304 aa16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 TRIP12Q14669 1992 aaPredicted RBP16.37■□□□□ 0.21
SMARCD2-205ENST00000577686 TET1Q8NFU7 2136 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 E7EWF7 191 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 SSTR3P32745 418 aaPredicted RBP16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 ARHGAP4P98171 946 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 TROAPQ12815 778 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 GPM6BQ13491 265 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 TCTN1Q2MV58 587 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 UTP14CQ5TAP6 766 aaKnown RBP16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 TMTC2Q8N394 836 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 EXOC6Q8TAG9 804 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 TOP1MTQ969P6 601 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 GPR20Q99678 358 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 MTA3Q9BTC8 594 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 LRFN3Q9BTN0 628 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 EPHX3Q9H6B9 360 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 EHMT1Q9H9B1 1298 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 SETD4Q9NVD3 440 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 BDP1A6H8Y1 2624 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 NCOR1O75376 2440 aa16.36■□□□□ 0.21
SMARCD2-205ENST00000577686 COL4A6Q14031 1691 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 H3BNC9 293 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 PIK3CDO00329 1044 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 GPR37L1O60883 481 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 UPP2O95045 317 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 CALM1P0DP23 149 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 CALM2P0DP24 149 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 CALM3P0DP25 149 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 ALADP13716 330 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 MRPS9P82933 396 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 PTCRAQ6ISU1 281 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 TMEM192Q8IY95 271 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 FIBCD1Q8N539 461 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 BANK1Q8NDB2 785 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 GPRASP2Q96D09 838 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 LMAN2LQ9H0V9 348 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 NSUN3Q9H649 340 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 RTEL1Q9NZ71 1219 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 RAPGEFL1Q9UHV5 662 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 SIP14410 1827 aa16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 TCF20Q9UGU0 1960 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-205ENST00000577686 TRANK1O15050 2925 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 CYTH3O43739 400 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 RB1P06400 928 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 SP4Q02446 784 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 HIC1Q14526 733 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 FAM26DQ5JW98 314 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms