RNA–Protein interactions for RNA: ENST00000576553.1

POLR2A-206, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-206ENST00000576553 BFSP2Q13515 415 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 REXO1Q8N1G1 1221 aaKnown RBP23.78■■□□□ 1.4
POLR2A-206ENST00000576553 CCDC155Q8N6L0 562 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 IL17RAQ96F46 866 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 PGBD1Q96JS3 809 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 GPR20Q99678 358 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 MXRA8Q9BRK3 442 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 LARP6Q9BRS8 491 aaKnown RBP23.78■■□□□ 1.4
POLR2A-206ENST00000576553 BCAS3Q9H6U6 928 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 IL23AQ9NPF7 189 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 SH3GLB2Q9NR46 395 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 TMEM260Q9NX78 707 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 GTF2IRD1Q9UHL9 959 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 UMODL1Q5DID0 1318 aa23.78■■□□□ 1.4
POLR2A-206ENST00000576553 PITPNM1O00562 1244 aa23.77■■□□□ 1.4
POLR2A-206ENST00000576553 PPFIA3O75145 1194 aa23.77■■□□□ 1.4
POLR2A-206ENST00000576553 LGALS2P05162 132 aa23.77■■□□□ 1.4
POLR2A-206ENST00000576553 JAKMIP3Q5VZ66 844 aa23.77■■□□□ 1.4
POLR2A-206ENST00000576553 RETREG2Q8NC44 543 aa23.77■■□□□ 1.4
POLR2A-206ENST00000576553 C16orf70Q9BSU1 422 aa23.77■■□□□ 1.4
POLR2A-206ENST00000576553 HDAC6Q9UBN7 1215 aa23.77■■□□□ 1.4
POLR2A-206ENST00000576553 H3BRB1 525 aa23.76■■□□□ 1.39
POLR2A-206ENST00000576553 CDKL5O76039 1030 aa23.76■■□□□ 1.39
POLR2A-206ENST00000576553 DEXIO95424 95 aa23.76■■□□□ 1.39
POLR2A-206ENST00000576553 KCNA2P16389 499 aa23.76■■□□□ 1.39
POLR2A-206ENST00000576553 ZNF76P36508 570 aa23.76■■□□□ 1.39
POLR2A-206ENST00000576553 CEP55Q53EZ4 464 aa23.76■■□□□ 1.39
POLR2A-206ENST00000576553 GDF6Q6KF10 455 aaPredicted RBP23.76■■□□□ 1.39
POLR2A-206ENST00000576553 RPUSD2Q8IZ73 545 aaKnown RBP23.76■■□□□ 1.39
POLR2A-206ENST00000576553 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.76■■□□□ 1.393e-8■□□□□ 8.9
POLR2A-206ENST00000576553 WNT8AQ9H1J5 351 aa23.76■■□□□ 1.39
POLR2A-206ENST00000576553 SLKQ9H2G2 1235 aaPredicted RBP23.76■■□□□ 1.39
POLR2A-206ENST00000576553 TUT1Q9H6E5 874 aaKnown RBP23.76■■□□□ 1.39
POLR2A-206ENST00000576553 ZNF215Q9UL58 517 aaPredicted RBP23.76■■□□□ 1.39
POLR2A-206ENST00000576553 ATP9AO75110 1047 aa23.75■■□□□ 1.39
POLR2A-206ENST00000576553 ARHGAP4P98171 946 aa23.75■■□□□ 1.39
POLR2A-206ENST00000576553 SP4Q02446 784 aa23.75■■□□□ 1.39
POLR2A-206ENST00000576553 TMEM240Q5SV17 173 aa23.75■■□□□ 1.39
POLR2A-206ENST00000576553 CAGE1Q8TC20 777 aa23.75■■□□□ 1.39
POLR2A-206ENST00000576553 MTIF3Q9H2K0 278 aaKnown RBP23.75■■□□□ 1.39
POLR2A-206ENST00000576553 KCNH7Q9NS40 1196 aa23.75■■□□□ 1.39
POLR2A-206ENST00000576553 VPS54Q9P1Q0 977 aa23.75■■□□□ 1.39
POLR2A-206ENST00000576553 ACRP10323 421 aa23.74■■□□□ 1.39
POLR2A-206ENST00000576553 ZNF365Q70YC5 407 aa23.74■■□□□ 1.39
POLR2A-206ENST00000576553 C16orf59Q7L2K0 433 aa23.74■■□□□ 1.39
POLR2A-206ENST00000576553 FAM177A1Q8N128 213 aaPredicted RBP23.74■■□□□ 1.39
POLR2A-206ENST00000576553 PKD2L1Q9P0L9 805 aa23.74■■□□□ 1.39
POLR2A-206ENST00000576553 PFKFB2O60825 505 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 SEC24BO95487 1268 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 FGBP02675 491 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 PFKMP08237 780 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 RFC2P35250 354 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 AK2P54819 239 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 NLRP5P59047 1200 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 SMAD3P84022 425 aaKnown RBP23.73■■□□□ 1.39
POLR2A-206ENST00000576553 UTP14CQ5TAP6 766 aaKnown RBP23.73■■□□□ 1.39
POLR2A-206ENST00000576553 NIPA1Q7RTP0 329 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 SEPT1Q8WYJ6 367 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 SCLYQ96I15 445 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 SDF4Q9BRK5 362 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 TPCN1Q9ULQ1 816 aa23.73■■□□□ 1.39
POLR2A-206ENST00000576553 MEIS1O00470 390 aa23.72■■□□□ 1.39
POLR2A-206ENST00000576553 CYP3A4P08684 503 aa23.72■■□□□ 1.39
POLR2A-206ENST00000576553 TCF7P36402 384 aaPredicted RBP23.72■■□□□ 1.39
POLR2A-206ENST00000576553 SCRN1Q12765 414 aa23.72■■□□□ 1.39
POLR2A-206ENST00000576553 PTK7Q13308 1070 aa23.72■■□□□ 1.39
POLR2A-206ENST00000576553 CYP2W1Q8TAV3 490 aa23.72■■□□□ 1.39
POLR2A-206ENST00000576553 AFAP1L1Q8TED9 768 aa23.72■■□□□ 1.39
POLR2A-206ENST00000576553 JPH1Q9HDC5 661 aaPredicted RBP23.72■■□□□ 1.39
POLR2A-206ENST00000576553 NFASCO94856 1347 aa23.72■■□□□ 1.39
POLR2A-206ENST00000576553 DOCK5Q9H7D0 1870 aa23.71■■□□□ 1.39
POLR2A-206ENST00000576553 C17orf102A2RUQ5 167 aa23.71■■□□□ 1.39
POLR2A-206ENST00000576553 HERVK_113Q902F9 699 aa23.71■■□□□ 1.39
POLR2A-206ENST00000576553 CTAGE1Q96RT6 745 aa23.71■■□□□ 1.39
POLR2A-206ENST00000576553 SLC9A2Q9UBY0 812 aa23.71■■□□□ 1.39
POLR2A-206ENST00000576553 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.7■■□□□ 1.38
POLR2A-206ENST00000576553 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.7■■□□□ 1.38
POLR2A-206ENST00000576553 IQCF3P0C7M6 154 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 SMIM10L2AP0DMW4 78 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 SMIM10L2BP0DMW5 78 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 ARP10275 920 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 GNAT1P11488 350 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 NEK4P51957 841 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 RBL2Q08999 1139 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 FAM109BQ6ICB4 259 aaPredicted RBP23.7■■□□□ 1.38
POLR2A-206ENST00000576553 PLA2G4DQ86XP0 818 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 TRIM50Q86XT4 487 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 CRYGNQ8WXF5 182 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 C22orf23Q9BZE7 217 aa23.7■■□□□ 1.38
POLR2A-206ENST00000576553 AGO4Q9HCK5 861 aaKnown RBP23.7■■□□□ 1.38
POLR2A-206ENST00000576553 LAMA3Q16787 3333 aa23.69■■□□□ 1.38
POLR2A-206ENST00000576553 STK36Q9NRP7 1315 aa23.69■■□□□ 1.38
POLR2A-206ENST00000576553 GSTTP1A0A1W2PQM5 241 aa23.69■■□□□ 1.38
POLR2A-206ENST00000576553 PARNO95453 639 aaKnown RBP23.69■■□□□ 1.38
POLR2A-206ENST00000576553 SELPP16109 830 aa23.69■■□□□ 1.38
POLR2A-206ENST00000576553 XBP1P17861 261 aa23.69■■□□□ 1.38
POLR2A-206ENST00000576553 SETQ01105 290 aaPredicted RBP23.69■■□□□ 1.38
POLR2A-206ENST00000576553 RASIP1Q5U651 963 aa23.69■■□□□ 1.38
POLR2A-206ENST00000576553 GALNT17Q6IS24 598 aa23.69■■□□□ 1.38
POLR2A-206ENST00000576553 DEFB123Q8N688 67 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms