RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 STK36Q9NRP7 1315 aa26.8■■□□□ 1.88
SNF8-217ENST00000576353 MEIS1O00470 390 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 CYP3A4P08684 503 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 XBP1P17861 261 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 MFSD10Q14728 455 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 MFSD5Q6N075 450 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 NIPA1Q7RTP0 329 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 SESTD1Q86VW0 696 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 C7orf31Q8N865 590 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 NECAB1Q8N987 351 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 WASF1Q92558 559 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 HIPK3Q9H422 1215 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 PCDHA4Q9UN74 947 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 LIMCH1Q9UPQ0 1083 aa26.79■■□□□ 1.88
SNF8-217ENST00000576353 HAS3O00219 553 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 ADAMTS3O15072 1205 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 FPGSQ05932 587 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 KIAA0753Q2KHM9 967 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 TMEM199Q8N511 208 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 CYP2W1Q8TAV3 490 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 CRYGNQ8WXF5 182 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 KIF2CQ99661 725 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 C16orf70Q9BSU1 422 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 ALG1Q9BT22 464 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 PPP1R12CQ9BZL4 782 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 NOD1Q9Y239 953 aa26.78■■□□□ 1.88
SNF8-217ENST00000576353 SCN10AQ9Y5Y9 1956 aa26.77■■□□□ 1.88
SNF8-217ENST00000576353 CTDNEP1O95476 244 aa26.77■■□□□ 1.88
SNF8-217ENST00000576353 LGALS2P05162 132 aa26.77■■□□□ 1.88
SNF8-217ENST00000576353 SP4Q02446 784 aa26.77■■□□□ 1.88
SNF8-217ENST00000576353 RASGRP4Q8TDF6 673 aa26.77■■□□□ 1.88
SNF8-217ENST00000576353 PPP1R13LQ8WUF5 828 aa26.77■■□□□ 1.88
SNF8-217ENST00000576353 PKD2L1Q9P0L9 805 aa26.77■■□□□ 1.88
SNF8-217ENST00000576353 ORC3Q9UBD5 711 aaPredicted RBP26.77■■□□□ 1.88
SNF8-217ENST00000576353 TRIOBPQ9H2D6 2365 aa26.76■■□□□ 1.87
SNF8-217ENST00000576353 H3BRB1 525 aa26.76■■□□□ 1.87
SNF8-217ENST00000576353 LARGE1O95461 756 aa26.76■■□□□ 1.87
SNF8-217ENST00000576353 PTGISQ16647 500 aa26.76■■□□□ 1.87
SNF8-217ENST00000576353 BLIDQ8IZY5 108 aa26.76■■□□□ 1.87
SNF8-217ENST00000576353 DAGLBQ8NCG7 672 aa26.76■■□□□ 1.87
SNF8-217ENST00000576353 AIFM3Q96NN9 605 aa26.76■■□□□ 1.87
SNF8-217ENST00000576353 SDF4Q9BRK5 362 aa26.76■■□□□ 1.87
SNF8-217ENST00000576353 NOC4LQ9BVI4 516 aaKnown RBP26.76■■□□□ 1.87
SNF8-217ENST00000576353 TUT1Q9H6E5 874 aaKnown RBP26.76■■□□□ 1.87
SNF8-217ENST00000576353 ARP10275 920 aa26.75■■□□□ 1.87
SNF8-217ENST00000576353 CYP2C18P33260 490 aa26.75■■□□□ 1.87
SNF8-217ENST00000576353 PPIGQ13427 754 aaKnown RBP eCLIP26.75■■□□□ 1.873e-7■■□□□ 12
SNF8-217ENST00000576353 PLA2G4DQ86XP0 818 aa26.75■■□□□ 1.87
SNF8-217ENST00000576353 SEPT1Q8WYJ6 367 aa26.75■■□□□ 1.87
SNF8-217ENST00000576353 AGO4Q9HCK5 861 aaKnown RBP26.75■■□□□ 1.87
SNF8-217ENST00000576353 JPH1Q9HDC5 661 aaPredicted RBP26.75■■□□□ 1.87
SNF8-217ENST00000576353 HDAC6Q9UBN7 1215 aa26.75■■□□□ 1.87
SNF8-217ENST00000576353 GTF2IRD1Q9UHL9 959 aa26.75■■□□□ 1.87
SNF8-217ENST00000576353 ZNF215Q9UL58 517 aaPredicted RBP26.75■■□□□ 1.87
SNF8-217ENST00000576353 NFASCO94856 1347 aa26.74■■□□□ 1.87
SNF8-217ENST00000576353 FAM86B1E9PN63 330 aa26.74■■□□□ 1.87
SNF8-217ENST00000576353 FAM86B2P0C5J1 330 aa26.74■■□□□ 1.87
SNF8-217ENST00000576353 CYP2C9P11712 490 aa26.74■■□□□ 1.87
SNF8-217ENST00000576353 RANBP2P49792 3224 aaKnown RBP26.73■■□□□ 1.87
SNF8-217ENST00000576353 CIITAP33076 1130 aa26.73■■□□□ 1.87
SNF8-217ENST00000576353 TCF7P36402 384 aaPredicted RBP26.73■■□□□ 1.87
SNF8-217ENST00000576353 FXR1P51114 621 aaKnown RBP eCLIP26.73■■□□□ 1.87
SNF8-217ENST00000576353 USP11P51784 963 aa26.73■■□□□ 1.87
SNF8-217ENST00000576353 SETQ01105 290 aaPredicted RBP26.73■■□□□ 1.87
SNF8-217ENST00000576353 UTP14CQ5TAP6 766 aaKnown RBP26.73■■□□□ 1.87
SNF8-217ENST00000576353 GDF6Q6KF10 455 aaPredicted RBP26.73■■□□□ 1.87
SNF8-217ENST00000576353 IL27Q8NEV9 243 aa26.73■■□□□ 1.87
SNF8-217ENST00000576353 ZSCAN31Q96LW9 406 aaPredicted RBP26.73■■□□□ 1.87
SNF8-217ENST00000576353 SLC9A2Q9UBY0 812 aa26.73■■□□□ 1.87
SNF8-217ENST00000576353 LTBP2Q14767 1821 aa26.73■■□□□ 1.87
SNF8-217ENST00000576353 MYH7BA7E2Y1 1941 aa26.73■■□□□ 1.87
SNF8-217ENST00000576353 IGLV3-22A0A075B6J6 115 aa26.72■■□□□ 1.87
SNF8-217ENST00000576353 RABEP1Q15276 862 aa26.72■■□□□ 1.87
SNF8-217ENST00000576353 LRIT3Q3SXY7 679 aa26.72■■□□□ 1.87
SNF8-217ENST00000576353 PHF20Q9BVI0 1012 aa26.72■■□□□ 1.87
SNF8-217ENST00000576353 KCNJ14Q9UNX9 436 aa26.72■■□□□ 1.87
SNF8-217ENST00000576353 TELO2Q9Y4R8 837 aa26.72■■□□□ 1.87
SNF8-217ENST00000576353 GSTTP1A0A1W2PQM5 241 aa26.71■■□□□ 1.87
SNF8-217ENST00000576353 FDPSP14324 419 aaKnown RBP26.71■■□□□ 1.87
SNF8-217ENST00000576353 CSF2RAP15509 400 aa26.71■■□□□ 1.87
SNF8-217ENST00000576353 BFSP2Q13515 415 aa26.71■■□□□ 1.87
SNF8-217ENST00000576353 SHHQ15465 462 aa26.71■■□□□ 1.87
SNF8-217ENST00000576353 CCDC155Q8N6L0 562 aa26.71■■□□□ 1.87
SNF8-217ENST00000576353 RETREG2Q8NC44 543 aa26.71■■□□□ 1.87
SNF8-217ENST00000576353 NSUN7Q8NE18 718 aaKnown RBP26.71■■□□□ 1.87
SNF8-217ENST00000576353 M0R2N6 131 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 PITPNM1O00562 1244 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 EPHB4P54760 987 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 CCL23P55773 120 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 ITGB3BPQ13352 177 aaPredicted RBP26.7■■□□□ 1.86
SNF8-217ENST00000576353 NPY5RQ15761 445 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 PRR16Q569H4 304 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 KRT25Q7Z3Z0 450 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 TBCKQ8TEA7 893 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 SH2B1Q9NRF2 756 aaPredicted RBP26.7■■□□□ 1.86
SNF8-217ENST00000576353 GTF3C3Q9Y5Q9 886 aa26.7■■□□□ 1.86
SNF8-217ENST00000576353 UMODL1Q5DID0 1318 aa26.69■■□□□ 1.86
SNF8-217ENST00000576353 IPO5O00410 1097 aaKnown RBP26.69■■□□□ 1.86
SNF8-217ENST00000576353 DTNBO60941 627 aa26.69■■□□□ 1.86
SNF8-217ENST00000576353 C9orf50Q5SZB4 431 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms