RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 MTMR8Q96EF0 704 aa11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 YME1L1Q96TA2 773 aa11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 RNPEPQ9H4A4 650 aa11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 NSUN3Q9H649 340 aaKnown RBP11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 TUT1Q9H6E5 874 aaKnown RBP11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 KAT14Q9H8E8 782 aa11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 ZSWIM5Q9P217 1185 aa11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 FAM50BQ9Y247 325 aa11.62□□□□□ -0.55
CALCOCO2-227ENST00000575560 MICAL3Q7RTP6 2002 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 C17orf102A2RUQ5 167 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 TREHO43280 583 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 NCK2O43639 380 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 SORBS3O60504 671 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 PPP1R11O60927 126 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 CAND2O75155 1236 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 KDM4AO75164 1064 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 UPP2O95045 317 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 PARP1P09874 1014 aaKnown RBP11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 LINC00271P0C7V0 271 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 SMIM10L2AP0DMW4 78 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 SMIM10L2BP0DMW5 78 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 MYCLP12524 364 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 IRS1P35568 1242 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 PGM5Q15124 567 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 DIEXFQ68CQ4 756 aaKnown RBP11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 SAMD3Q8N6K7 520 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 AMNQ9BXJ7 453 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 BCAS3Q9H6U6 928 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 COL4A6Q14031 1691 aa11.61□□□□□ -0.55
CALCOCO2-227ENST00000575560 C5orf67F2Z3F1 127 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 UBA1P22314 1058 aaKnown RBP11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 ADAM17P78536 824 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 FAM26DQ5JW98 314 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 HFE2Q6ZVN8 426 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 STAG2Q8N3U4 1231 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 APBB2Q92870 758 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 UPF3BQ9BZI7 483 aaKnown RBP11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 MLXIPQ9HAP2 919 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 CLDND1Q9NY35 253 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 MYH7BA7E2Y1 1941 aa11.6□□□□□ -0.55
CALCOCO2-227ENST00000575560 MYO7AQ13402 2215 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 B4E1Z4 1266 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 DHX16O60231 1041 aaKnown RBP11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 LGALS2P05162 132 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 RB1P06400 928 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 SDSP20132 328 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 HOXA13P31271 388 aaPredicted RBP11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 BMPR1AP36894 532 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 DLX2Q07687 328 aaPredicted RBP11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 HYAL1Q12794 435 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 SMAD2Q15796 467 aaKnown RBP11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 EP400NLQ6ZTU2 488 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 IL17RAQ96F46 866 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 USP26Q9BXU7 913 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 IFIH1Q9BYX4 1025 aaKnown RBP11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 LMAN2LQ9H0V9 348 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 ZBTB47Q9UFB7 747 aaPredicted RBP11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 PCDHA1Q9Y5I3 950 aa11.59□□□□□ -0.55
CALCOCO2-227ENST00000575560 TRIM6-TRIM34B2RNG4 842 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 KLRF2D3W0D1 207 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 ZBTB5O15062 677 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 CTSHP09668 335 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 GNAT1P11488 350 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 CCND2P30279 289 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 ICAM3P32942 547 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 HERC4Q5GLZ8 1057 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 FIBCD1Q8N539 461 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 CLP1Q92989 425 aaKnown RBP11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 ZFP91Q96JP5 570 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 RC3H2Q9HBD1 1191 aaKnown RBP11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 SETD4Q9NVD3 440 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 MAD2L2Q9UI95 211 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 ZNF318Q5VUA4 2279 aa11.58□□□□□ -0.56
CALCOCO2-227ENST00000575560 CFAP54Q96N23 3096 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 SPATA31C2B4DYI2 1134 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 GCOM1H8Y6P7 765 aaPredicted RBP11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 GRM6O15303 877 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 MBTPS2O43462 519 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 CHRNA1P02708 482 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 POLR2MP0CAP2 368 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 MRPS9P82933 396 aaKnown RBP11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 HDAC1Q13547 482 aaPredicted RBP11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 SEC23AQ15436 765 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 SLC35G1Q2M3R5 365 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 METTL7BQ6UX53 244 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 RILPL2Q969X0 211 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 ZNF689Q96CS4 500 aaPredicted RBP11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 MFSD14AQ96MC6 490 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 POP1Q99575 1024 aaKnown RBP11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 GPR20Q99678 358 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 C11orf84Q9BUA3 381 aaPredicted RBP11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 EHMT1Q9H9B1 1298 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 MUTYHQ9UIF7 546 aa11.57□□□□□ -0.56
CALCOCO2-227ENST00000575560 NOP56O00567 594 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms