RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ARP10275 920 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 KCNA2P16389 499 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 CIITAP33076 1130 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 CHMP4BP1P59074 171 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 SP4Q02446 784 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 SNX17Q15036 470 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 HSDL1Q3SXM5 330 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 TRIM60Q495X7 471 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 PRR16Q569H4 304 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 PIK3AP1Q6ZUJ8 805 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 CRYGNQ8WXF5 182 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 PRKAG2Q9UGJ0 569 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 TCEAL9Q9UHQ7 104 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 MYH9P35579 1960 aaKnown RBP17.28■□□□□ 0.36
LITAF-217ENST00000575426 DCDC2CA8MYV0 355 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 TLR3O15455 904 aaKnown RBP17.27■□□□□ 0.36
LITAF-217ENST00000575426 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 GUCY1B3Q02153 619 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
LITAF-217ENST00000575426 INF2Q27J81 1249 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
LITAF-217ENST00000575426 OXER1Q8TDS5 423 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 NAP1L4Q99733 375 aaKnown RBP17.27■□□□□ 0.36
LITAF-217ENST00000575426 ZNF577Q9BSK1 485 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 KATNAL1Q9BW62 490 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 BCAS3Q9H6U6 928 aa17.27■□□□□ 0.36
LITAF-217ENST00000575426 AGO4Q9HCK5 861 aaKnown RBP17.27■□□□□ 0.36
LITAF-217ENST00000575426 NFASCO94856 1347 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 DNAH12Q6ZR08 3092 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 BTBD18B2RXH4 712 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 PQBP1O60828 265 aaKnown RBP17.26■□□□□ 0.35
LITAF-217ENST00000575426 GJB2P29033 226 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 PSMC6P62333 389 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 TLE2Q04725 743 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 NEK8Q86SG6 692 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 FBXO18Q8NFZ0 1043 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 SEPT1Q8WYJ6 367 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 TOX2Q96NM4 488 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 SLC9A2Q9UBY0 812 aa17.26■□□□□ 0.35
LITAF-217ENST00000575426 MKI67P46013 3256 aaKnown RBP17.25■□□□□ 0.35
LITAF-217ENST00000575426 WDR81Q562E7 1941 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 IGLV3-22A0A075B6J6 115 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 IPO5O00410 1097 aaKnown RBP17.25■□□□□ 0.35
LITAF-217ENST00000575426 CDK7P50613 346 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 NR5A1Q13285 461 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 LETM2Q2VYF4 491 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 NBPF20Q3BBV1 942 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 FAM47CQ5HY64 1035 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 MOXD1Q6UVY6 613 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 GPR20Q99678 358 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 JPH1Q9HDC5 661 aaPredicted RBP17.25■□□□□ 0.35
LITAF-217ENST00000575426 TBC1D22BQ9NU19 505 aa17.25■□□□□ 0.35
LITAF-217ENST00000575426 TRIP12Q14669 1992 aaPredicted RBP17.24■□□□□ 0.35
LITAF-217ENST00000575426 K7ELQ4 463 aaPredicted RBP17.24■□□□□ 0.35
LITAF-217ENST00000575426 HOXD8P13378 290 aaPredicted RBP17.24■□□□□ 0.35
LITAF-217ENST00000575426 PSEN2P49810 448 aa17.24■□□□□ 0.35
LITAF-217ENST00000575426 UTP14CQ5TAP6 766 aaKnown RBP17.24■□□□□ 0.35
LITAF-217ENST00000575426 NFRKBQ6P4R8 1299 aa17.24■□□□□ 0.35
LITAF-217ENST00000575426 ANKRD33Q7Z3H0 272 aa17.24■□□□□ 0.35
LITAF-217ENST00000575426 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
LITAF-217ENST00000575426 SLC43A3Q8NBI5 491 aa17.24■□□□□ 0.35
LITAF-217ENST00000575426 PRDM5Q9NQX1 630 aaPredicted RBP17.24■□□□□ 0.35
LITAF-217ENST00000575426 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 H3BQV1 296 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 H3BRB1 525 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 DDX39AO00148 427 aaKnown RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 MARCH6O60337 910 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 CCNT1O60563 726 aaKnown RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 LGALS2P05162 132 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 CLTBP09497 229 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 ZNF286BP0CG31 522 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 GCFC2P16383 781 aaKnown RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 CYP3A7P24462 503 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 TCF7P36402 384 aaPredicted RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 ITGB3BPQ13352 177 aaPredicted RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 CUL4AQ13619 759 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 MFSD10Q14728 455 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 Q4G0T1 1027 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 C7orf31Q8N865 590 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 SNX21Q969T3 373 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 UIMC1Q96RL1 719 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 FOXP1Q9H334 677 aaPredicted RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 TUT1Q9H6E5 874 aaKnown RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 TMEM39AQ9NV64 488 aa17.23■□□□□ 0.35
LITAF-217ENST00000575426 DDX25Q9UHL0 483 aaKnown RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 ZNF215Q9UL58 517 aaPredicted RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 ZMYND8Q9ULU4 1186 aaPredicted RBP17.23■□□□□ 0.35
LITAF-217ENST00000575426 GRIN2DO15399 1336 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 H0YGN5 161 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 TDP2O95551 362 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 F2P00734 622 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 SUPT20HL2P0C7V6 817 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 SYN1P17600 705 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 KIAA0753Q2KHM9 967 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 KAT2BQ92831 832 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 TNFRSF25Q93038 417 aa17.22■□□□□ 0.35
LITAF-217ENST00000575426 C16orf70Q9BSU1 422 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms