RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 NEK4P51957 841 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 POU5F1Q01860 360 aaKnown RBP6.07□□□□□ -1.44
TSR1-203ENST00000575049 CHRNEQ04844 493 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 MYBPC2Q14324 1141 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 GBX1Q14549 363 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 GRM3Q14832 879 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 SAFBQ15424 915 aaKnown RBP eCLIP6.07□□□□□ -1.44
TSR1-203ENST00000575049 PTPN21Q16825 1174 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 FAM43BQ6ZT52 329 aaPredicted RBP6.07□□□□□ -1.44
TSR1-203ENST00000575049 ZSWIM9Q86XI8 627 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 SPPL2CQ8IUH8 684 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 SCUBE1Q8IWY4 988 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 ANKS4BQ8N8V4 417 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 VPS37AQ8NEZ2 397 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 ATXN2LQ8WWM7 1075 aaKnown RBP6.07□□□□□ -1.44
TSR1-203ENST00000575049 MYLIPQ8WY64 445 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 FAM168AQ92567 244 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 TRMT2BQ96GJ1 504 aaKnown RBP6.07□□□□□ -1.44
TSR1-203ENST00000575049 IPO9Q96P70 1041 aaKnown RBP6.07□□□□□ -1.44
TSR1-203ENST00000575049 TTC1Q99614 292 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 SP110Q9HB58 689 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 TRIM39Q9HCM9 518 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 TCF7L1Q9HCS4 588 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 PLCB1Q9NQ66 1216 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 ERVK13-1Q9NX77 482 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 IPPQ9Y573 584 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 CARMIL2Q6F5E8 1435 aa6.07□□□□□ -1.44
TSR1-203ENST00000575049 EPB41L2O43491 1005 aaKnown RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 USP2O75604 605 aaPredicted RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 CT47B1P0C2W7 299 aaPredicted RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 TRHRP34981 398 aaPredicted RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 CASP2P42575 452 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 KIR2DL1P43626 348 aaPredicted RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 KIR2DL2P43627 348 aaPredicted RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 NOP2P46087 812 aaKnown RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 ID4P47928 161 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 GRB10Q13322 594 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 NR0B2Q15466 257 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 KCNMB1Q16558 191 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 SLC4A8Q2Y0W8 1093 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 ICE2Q659A1 982 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 ZNF354CQ86Y25 554 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 IFNL2Q8IZJ0 200 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 ABHD4Q8TB40 342 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 SLC7A14Q8TBB6 771 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 GJA10Q969M2 543 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 ASIC4Q96FT7 647 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 HHIPL1Q96JK4 782 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 FCRL3Q96P31 734 aaPredicted RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 C19orf44Q9H6X5 657 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 IFT22Q9H7X7 185 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 C9orf78Q9NZ63 289 aaPredicted RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 AKT3Q9Y243 479 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 FAM50BQ9Y247 325 aa6.06□□□□□ -1.44
TSR1-203ENST00000575049 TNPO3Q9Y5L0 923 aaKnown RBP6.06□□□□□ -1.44
TSR1-203ENST00000575049 CLSPNQ9HAW4 1339 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 AGRPO00253 132 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 NBNO60934 754 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 VAMP4O75379 141 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 IFNGR1P15260 489 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 BPIP17213 487 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 TYRP1P17643 537 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 AMPD2Q01433 879 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 CHAF1AQ13111 956 aaPredicted RBP6.05□□□□□ -1.44
TSR1-203ENST00000575049 GALEQ14376 348 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 KRT72Q14CN4 511 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 TIGD5Q53EQ6 642 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 TRIM61Q5EBN2 209 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 CEP128Q6ZU80 1094 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 LILRA2Q8N149 483 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 CBARPQ8N350 705 aaPredicted RBP6.05□□□□□ -1.44
TSR1-203ENST00000575049 CRACR2BQ8N4Y2 399 aaPredicted RBP6.05□□□□□ -1.44
TSR1-203ENST00000575049 BVESQ8NE79 360 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 USP7Q93009 1102 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 PPP1R14AQ96A00 147 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 CLIP3Q96DZ5 547 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 MCMBPQ9BTE3 642 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 SELENOOQ9BVL4 669 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 DDX21Q9NR30 783 aaKnown RBP eCLIP6.05□□□□□ -1.44
TSR1-203ENST00000575049 TNFRSF10DQ9UBN6 386 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 RCAN3Q9UKA8 241 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 ZBTB21Q9ULJ3 1066 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 PNMA8BQ9ULN7 279 aaPredicted RBP6.05□□□□□ -1.44
TSR1-203ENST00000575049 PHTF1Q9UMS5 762 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 ANKRD6Q9Y2G4 727 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 GPR55Q9Y2T6 319 aaPredicted RBP6.05□□□□□ -1.44
TSR1-203ENST00000575049 EMC9Q9Y3B6 208 aa6.05□□□□□ -1.44
TSR1-203ENST00000575049 FRMPD2Q68DX3 1309 aaPredicted RBP6.04□□□□□ -1.44
TSR1-203ENST00000575049 FADS2P1A8MWK0 482 aa6.04□□□□□ -1.44
TSR1-203ENST00000575049 STXBP3O00186 592 aa6.04□□□□□ -1.44
TSR1-203ENST00000575049 NOP56O00567 594 aaKnown RBP6.04□□□□□ -1.44
TSR1-203ENST00000575049 AURKAO14965 403 aa6.04□□□□□ -1.44
TSR1-203ENST00000575049 FGF10O15520 208 aaPredicted RBP6.04□□□□□ -1.44
TSR1-203ENST00000575049 ZEB2O60315 1214 aa6.04□□□□□ -1.44
TSR1-203ENST00000575049 KPNA6O60684 536 aa6.04□□□□□ -1.44
TSR1-203ENST00000575049 GLI1P08151 1106 aa6.04□□□□□ -1.44
TSR1-203ENST00000575049 PF4V1P10720 104 aa6.04□□□□□ -1.44
TSR1-203ENST00000575049 MCCP23508 829 aa6.04□□□□□ -1.44
TSR1-203ENST00000575049 CEBPAP49715 358 aaPredicted RBP6.04□□□□□ -1.44
TSR1-203ENST00000575049 SUMO1P63165 101 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms