RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PSTPIP2Q9H939 334 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 SH2B1Q9NRF2 756 aaPredicted RBP12.13□□□□□ -0.47
LITAF-216ENST00000574848 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
LITAF-216ENST00000574848 CHD9Q3L8U1 2897 aa12.13□□□□□ -0.47
LITAF-216ENST00000574848 KLF18A0A0U1RQI7 1052 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 GOLGA8AA7E2F4 631 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 FGBP02675 491 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 IQCF3P0C7M6 154 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 CUL4AQ13619 759 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 PTGISQ16647 500 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 TYW1BQ6NUM6 668 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 PPP1R13LQ8WUF5 828 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 DHX38Q92620 1227 aaKnown RBP12.12□□□□□ -0.47
LITAF-216ENST00000574848 PBX4Q9BYU1 374 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 PDRG1Q9NUG6 133 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 CXXC1Q9P0U4 656 aaPredicted RBP12.12□□□□□ -0.47
LITAF-216ENST00000574848 HDAC6Q9UBN7 1215 aa12.12□□□□□ -0.47
LITAF-216ENST00000574848 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.12□□□□□ -0.47
LITAF-216ENST00000574848 hCG_1642624A0A1W2PR95 340 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 STXBP3O00186 592 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 PARNO95453 639 aaKnown RBP12.11□□□□□ -0.47
LITAF-216ENST00000574848 LGALS2P05162 132 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 PDIA4P13667 645 aaKnown RBP12.11□□□□□ -0.47
LITAF-216ENST00000574848 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 CDC27P30260 824 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 EVCP57679 992 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 PTK7Q13308 1070 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 UBE2SQ16763 222 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
LITAF-216ENST00000574848 HEATR3Q7Z4Q2 680 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 NLRX1Q86UT6 975 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 CCDC82Q8N4S0 544 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 C7orf31Q8N865 590 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
LITAF-216ENST00000574848 TIFAQ96CG3 184 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
LITAF-216ENST00000574848 CDHR1Q96JP9 859 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
LITAF-216ENST00000574848 GPR20Q99678 358 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 LIMCH1Q9UPQ0 1083 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 NOD1Q9Y239 953 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 UBIAD1Q9Y5Z9 338 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
LITAF-216ENST00000574848 CCDC196A0A1B0GTZ2 297 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 ESYT2A0FGR8 921 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 CPA1P15085 419 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 SELPP16109 830 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 KCNA2P16389 499 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 ITGB5P18084 799 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 CLK2P49760 499 aaKnown RBP12.1□□□□□ -0.47
LITAF-216ENST00000574848 RAB30Q15771 203 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 Q6ZUG5 572 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 LRRC8DQ7L1W4 858 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 OTOP2Q7RTS6 562 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 BRF1Q92994 677 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 FAM161BQ96MY7 647 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 GLT8D2Q9H1C3 349 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 EHMT1Q9H9B1 1298 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 PCDHA6Q9UN73 950 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 PCDHA8Q9Y5H6 950 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 TRIP12Q14669 1992 aaPredicted RBP12.1□□□□□ -0.47
LITAF-216ENST00000574848 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
LITAF-216ENST00000574848 H3BRB1 525 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 NOP56O00567 594 aaKnown RBP12.09□□□□□ -0.47
LITAF-216ENST00000574848 MAFGO15525 162 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 FOSP01100 380 aaPredicted RBP12.09□□□□□ -0.47
LITAF-216ENST00000574848 CXCL10P02778 98 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 CKBP12277 381 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 ACTN1P12814 892 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 PBX2P40425 430 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.47
LITAF-216ENST00000574848 ADCY7P51828 1080 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 AK2P54819 239 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 NAPAP54920 295 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 AP3B2Q13367 1082 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 HIC1Q14526 733 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 GPNMBQ14956 572 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 PFKFB3Q16875 520 aaPredicted RBP12.09□□□□□ -0.47
LITAF-216ENST00000574848 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 SERINC5Q86VE9 423 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 TUT1Q9H6E5 874 aaKnown RBP12.09□□□□□ -0.47
LITAF-216ENST00000574848 JADE2Q9NQC1 790 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
LITAF-216ENST00000574848 SLC4A7Q9Y6M7 1214 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms