RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 PFKMP08237 780 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 KCNA2P16389 499 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 HOXC8P31273 242 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 BFSP2Q13515 415 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 GPNMBQ14956 572 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 PKN1Q16512 942 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 OTOP2Q7RTS6 562 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 CAGE1Q8TC20 777 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 FAM161BQ96MY7 647 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 TM6SF1Q9BZW5 370 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 NAP1L2Q9ULW6 460 aaPredicted RBP22.58■■□□□ 1.21
SCARF1-208ENST00000574545 NOD1Q9Y239 953 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 SCN5AQ14524 2016 aa22.58■■□□□ 1.2
SCARF1-208ENST00000574545 DOCK5Q9H7D0 1870 aa22.58■■□□□ 1.2
SCARF1-208ENST00000574545 TET1Q8NFU7 2136 aa22.57■■□□□ 1.2
SCARF1-208ENST00000574545 SMCO2A6NFE2 343 aa22.57■■□□□ 1.2
SCARF1-208ENST00000574545 H3BRB1 525 aa22.57■■□□□ 1.2
SCARF1-208ENST00000574545 PDIA3P30101 505 aaKnown RBP22.57■■□□□ 1.2
SCARF1-208ENST00000574545 RFC2P35250 354 aa22.57■■□□□ 1.2
SCARF1-208ENST00000574545 ZNF200P98182 395 aaPredicted RBP22.57■■□□□ 1.2
SCARF1-208ENST00000574545 TOB2Q14106 344 aaPredicted RBP22.57■■□□□ 1.2
SCARF1-208ENST00000574545 TRIM71Q2Q1W2 868 aaKnown RBP22.57■■□□□ 1.2
SCARF1-208ENST00000574545 RETREG2Q8NC44 543 aa22.57■■□□□ 1.2
SCARF1-208ENST00000574545 TUT1Q9H6E5 874 aaKnown RBP22.57■■□□□ 1.2
SCARF1-208ENST00000574545 JADE2Q9NQC1 790 aa22.57■■□□□ 1.2
SCARF1-208ENST00000574545 MAFGO15525 162 aa22.56■■□□□ 1.2
SCARF1-208ENST00000574545 PRPF3O43395 683 aaKnown RBP22.56■■□□□ 1.2
SCARF1-208ENST00000574545 FOSP01100 380 aaPredicted RBP22.56■■□□□ 1.2
SCARF1-208ENST00000574545 DNAJB2P25686 324 aa22.56■■□□□ 1.2
SCARF1-208ENST00000574545 GIMAP8Q8ND71 665 aaPredicted RBP22.56■■□□□ 1.2
SCARF1-208ENST00000574545 AFAP1L1Q8TED9 768 aa22.56■■□□□ 1.2
SCARF1-208ENST00000574545 WNT8BQ93098 351 aa22.56■■□□□ 1.2
SCARF1-208ENST00000574545 CDHR1Q96JP9 859 aa22.56■■□□□ 1.2
SCARF1-208ENST00000574545 PBX4Q9BYU1 374 aa22.56■■□□□ 1.2
SCARF1-208ENST00000574545 NOP56O00567 594 aaKnown RBP22.55■■□□□ 1.2
SCARF1-208ENST00000574545 SCG2P13521 617 aa22.55■■□□□ 1.2
SCARF1-208ENST00000574545 PBX2P40425 430 aa22.55■■□□□ 1.2
SCARF1-208ENST00000574545 ADCY7P51828 1080 aa22.55■■□□□ 1.2
SCARF1-208ENST00000574545 PTK7Q13308 1070 aa22.55■■□□□ 1.2
SCARF1-208ENST00000574545 TRAF7Q6Q0C0 670 aa22.55■■□□□ 1.2
SCARF1-208ENST00000574545 DEFB128Q7Z7B8 93 aa22.55■■□□□ 1.2
SCARF1-208ENST00000574545 PGBD1Q96JS3 809 aa22.55■■□□□ 1.2
SCARF1-208ENST00000574545 CDX2Q99626 313 aaPredicted RBP22.55■■□□□ 1.2
SCARF1-208ENST00000574545 GLT8D2Q9H1C3 349 aa22.55■■□□□ 1.2
SCARF1-208ENST00000574545 TANC1Q9C0D5 1861 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 ADAMTS3O15072 1205 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 SELPP16109 830 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 AP3B2Q13367 1082 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 CCDC155Q8N6L0 562 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 CYP2W1Q8TAV3 490 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 CRYGNQ8WXF5 182 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 MXRA8Q9BRK3 442 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 ANO3Q9BYT9 981 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 ZMYND12Q9H0C1 365 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 MTIF3Q9H2K0 278 aaKnown RBP22.54■■□□□ 1.2
SCARF1-208ENST00000574545 RNPEPQ9H4A4 650 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 TMEM260Q9NX78 707 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 CYP46A1Q9Y6A2 500 aa22.54■■□□□ 1.2
SCARF1-208ENST00000574545 GSTTP1A0A1W2PQM5 241 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 ESYT2A0FGR8 921 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 CKBP12277 381 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 IFNAR1P17181 557 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 SREBF1P36956 1147 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 MTMR1Q13613 665 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 PHKBQ93100 1093 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 EHMT1Q9H9B1 1298 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 KCNH7Q9NS40 1196 aa22.53■■□□□ 1.2
SCARF1-208ENST00000574545 CXCL10P02778 98 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 SMIM10L2AP0DMW4 78 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 SMIM10L2BP0DMW5 78 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 CCT2P78371 535 aaKnown RBP22.52■■□□□ 1.2
SCARF1-208ENST00000574545 ADAM17P78536 824 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 LRRC8DQ7L1W4 858 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 SERINC5Q86VE9 423 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 TRIM50Q86XT4 487 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 TIFAQ96CG3 184 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 RNF26Q9BY78 433 aaPredicted RBP22.52■■□□□ 1.2
SCARF1-208ENST00000574545 UPF3BQ9BZI7 483 aaKnown RBP22.52■■□□□ 1.2
SCARF1-208ENST00000574545 SLC4A7Q9Y6M7 1214 aa22.52■■□□□ 1.2
SCARF1-208ENST00000574545 CHD9Q3L8U1 2897 aa22.52■■□□□ 1.19
SCARF1-208ENST00000574545 MEIS1O00470 390 aa22.51■■□□□ 1.19
SCARF1-208ENST00000574545 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
SCARF1-208ENST00000574545 ARP10275 920 aa22.51■■□□□ 1.19
SCARF1-208ENST00000574545 SP4Q02446 784 aa22.51■■□□□ 1.19
SCARF1-208ENST00000574545 CEP55Q53EZ4 464 aa22.51■■□□□ 1.19
SCARF1-208ENST00000574545 UTP14CQ5TAP6 766 aaKnown RBP22.51■■□□□ 1.19
SCARF1-208ENST00000574545 SEPT1Q8WYJ6 367 aa22.51■■□□□ 1.19
SCARF1-208ENST00000574545 ZNF274Q96GC6 653 aaPredicted RBP22.51■■□□□ 1.19
SCARF1-208ENST00000574545 NCOA5Q9HCD5 579 aaKnown RBP22.51■■□□□ 1.19
SCARF1-208ENST00000574545 EYSQ5T1H1 3165 aa22.5■■□□□ 1.19
SCARF1-208ENST00000574545 C17orf102A2RUQ5 167 aa22.5■■□□□ 1.19
SCARF1-208ENST00000574545 TREHO43280 583 aa22.5■■□□□ 1.19
SCARF1-208ENST00000574545 NBNO60934 754 aa22.5■■□□□ 1.19
SCARF1-208ENST00000574545 PARNO95453 639 aaKnown RBP22.5■■□□□ 1.19
SCARF1-208ENST00000574545 TCF7P36402 384 aaPredicted RBP22.5■■□□□ 1.19
SCARF1-208ENST00000574545 MBTPS1Q14703 1052 aa22.5■■□□□ 1.19
SCARF1-208ENST00000574545 GRIN2CQ14957 1233 aa22.5■■□□□ 1.19
SCARF1-208ENST00000574545 ZNF618Q5T7W0 954 aa22.5■■□□□ 1.19
SCARF1-208ENST00000574545 JAKMIP3Q5VZ66 844 aa22.5■■□□□ 1.19
SCARF1-208ENST00000574545 ZNF576Q9H609 170 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms