RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TAF4BQ92750 862 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 PSMD1Q99460 953 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 PANK4Q9NVE7 773 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 PNMA2Q9UL42 364 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 C15orf41Q9Y2V0 281 aa15.81■□□□□ 0.12
SMG6-215ENST00000574501 CCDC194A0A1B0GVG4 234 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 SART1O43290 800 aaKnown RBP15.8■□□□□ 0.12
SMG6-215ENST00000574501 CALM1P0DP23 149 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 CALM2P0DP24 149 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 CALM3P0DP25 149 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 FGFR2P21802 821 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 KIF6Q6ZMV9 814 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 AGAP11Q8TF27 550 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 P3H4Q92791 437 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 XPO6Q96QU8 1125 aaKnown RBP15.8■□□□□ 0.12
SMG6-215ENST00000574501 CCSER1Q9C0I3 900 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 TRPC6Q9Y210 931 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 SLC5A1P13866 664 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 KCNMA1Q12791 1236 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 FAM47AQ5JRC9 791 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 CEP120Q8N960 986 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 CABLES1Q8TDN4 633 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 ADAMTS1Q9UHI8 967 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 AMACRQ9UHK6 382 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.8■□□□□ 0.12
SMG6-215ENST00000574501 PCDHGC5Q9Y5F6 944 aa15.8■□□□□ 0.12
SMG6-215ENST00000574501 A0A087X0T9 212 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 RBAK-RBAKDNI3L0D1 243 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 FAM228BP0C875 321 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 DHX9Q08211 1270 aaKnown RBP15.79■□□□□ 0.12
SMG6-215ENST00000574501 RPS6KA1Q15418 735 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 ERMARDQ5T6L9 678 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 SFMBT2Q5VUG0 894 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 CENPPQ6IPU0 288 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 TAX1BP1Q86VP1 789 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 SPAG5Q96R06 1193 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 ABCF2Q9UG63 623 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 GGT7Q9UJ14 662 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 FLT1P17948 1338 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 MYH7BA7E2Y1 1941 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 ENO4A6NNW6 628 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 DDAH1O94760 285 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 CNNM4Q6P4Q7 775 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 ANKS4BQ8N8V4 417 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMG6-215ENST00000574501 ZNF570Q96NI8 536 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 DPH5Q9H2P9 285 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 SWAP70Q9UH65 585 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 SLC12A4Q9UP95 1085 aa15.79■□□□□ 0.12
SMG6-215ENST00000574501 CAND2O75155 1236 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 ITGA4P13612 1032 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 CHN1P15882 459 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 POLR2FP61218 127 aaKnown RBP15.78■□□□□ 0.12
SMG6-215ENST00000574501 DYNLL1P63167 89 aaKnown RBP15.78■□□□□ 0.12
SMG6-215ENST00000574501 TMC3Q7Z5M5 1100 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 NLRP10Q86W26 655 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 SCFD2Q8WU76 684 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 C7orf25Q9BPX7 421 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 SELENOSQ9BQE4 189 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 FAM129AQ9BZQ8 928 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 TRIM31Q9BZY9 425 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 MTFR1LQ9H019 292 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 KANSL2Q9H9L4 492 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 TRMT112Q9UI30 125 aaKnown RBP15.78■□□□□ 0.12
SMG6-215ENST00000574501 ANAPC4Q9UJX5 808 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 PCDHA4Q9UN74 947 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 AGAP1Q9UPQ3 857 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 STRCP1A6NGW2 1772 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 MAGEB6P1A0A0J9YX57 407 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 DIAPH2O60879 1101 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 SERPING1P05155 500 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 CALML3P27482 149 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 FAM83BQ5T0W9 1011 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 DYMQ7RTS9 669 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 MICAL1Q8TDZ2 1067 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 ANKS1AQ92625 1134 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 PRCCQ92733 491 aaPredicted RBP15.78■□□□□ 0.12
SMG6-215ENST00000574501 ELAC2Q9BQ52 826 aaKnown RBP15.78■□□□□ 0.12
SMG6-215ENST00000574501 CELF4Q9BZC1 486 aaKnown RBP15.78■□□□□ 0.12
SMG6-215ENST00000574501 BATF3Q9NR55 127 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 TCP11L1Q9NUJ3 509 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 ATP8A1Q9Y2Q0 1164 aa15.78■□□□□ 0.12
SMG6-215ENST00000574501 EIF4E1BA6NMX2 242 aaKnown RBP15.77■□□□□ 0.12
SMG6-215ENST00000574501 F8VZ95 297 aa15.77■□□□□ 0.12
SMG6-215ENST00000574501 TTI1O43156 1089 aa15.77■□□□□ 0.12
SMG6-215ENST00000574501 NOL4O94818 638 aa15.77■□□□□ 0.12
SMG6-215ENST00000574501 MMEP08473 750 aa15.77■□□□□ 0.12
SMG6-215ENST00000574501 KCNJ2P63252 427 aa15.77■□□□□ 0.12
SMG6-215ENST00000574501 MTMR3Q13615 1198 aa15.77■□□□□ 0.12
SMG6-215ENST00000574501 CRELD2Q6UXH1 353 aaPredicted RBP15.77■□□□□ 0.12
SMG6-215ENST00000574501 GLIS3Q8NEA6 775 aa15.77■□□□□ 0.12
SMG6-215ENST00000574501 ZNF317Q96PQ6 595 aaPredicted RBP15.77■□□□□ 0.12
SMG6-215ENST00000574501 SPATS2LQ9NUQ6 558 aaKnown RBP15.77■□□□□ 0.12
SMG6-215ENST00000574501 TNS3Q68CZ2 1445 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 SMIM23A6NLE4 172 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 KIF4AO95239 1232 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 RAPGEF1Q13905 1077 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 LRRC41Q15345 812 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 SLC18A3Q16572 532 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 CAPRIN2Q6IMN6 1127 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms