RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 FAM217BQ9NTX9 383 aaPredicted RBP18.9■□□□□ 0.62
TVP23B-206ENST00000574226 MSRAQ9UJ68 235 aa18.9■□□□□ 0.62
TVP23B-206ENST00000574226 SLC4A7Q9Y6M7 1214 aa18.9■□□□□ 0.62
TVP23B-206ENST00000574226 LGALS2P05162 132 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 GNAT1P11488 350 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 SELPP16109 830 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 EVCP57679 992 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 APOBRQ0VD83 1088 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 SEMA3FQ13275 785 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 AP3B2Q13367 1082 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 MTMR1Q13613 665 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 OTOP2Q7RTS6 562 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 TIFAQ96CG3 184 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 ZFP91Q96JP5 570 aaPredicted RBP18.89■□□□□ 0.61
TVP23B-206ENST00000574226 GUCD1Q96NT3 240 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 TM6SF1Q9BZW5 370 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 UBIAD1Q9Y5Z9 338 aa18.89■□□□□ 0.61
TVP23B-206ENST00000574226 SMCO2A6NFE2 343 aa18.88■□□□□ 0.61
TVP23B-206ENST00000574226 STXBP3O00186 592 aa18.88■□□□□ 0.61
TVP23B-206ENST00000574226 SCG2P13521 617 aa18.88■□□□□ 0.61
TVP23B-206ENST00000574226 CDC27P30260 824 aa18.88■□□□□ 0.61
TVP23B-206ENST00000574226 ADD1P35611 737 aaKnown RBP18.88■□□□□ 0.61
TVP23B-206ENST00000574226 AKAP17AQ02040 695 aaKnown RBP18.88■□□□□ 0.61
TVP23B-206ENST00000574226 UBE2SQ16763 222 aa18.88■□□□□ 0.61
TVP23B-206ENST00000574226 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
TVP23B-206ENST00000574226 RUFY3Q7L099 469 aa18.88■□□□□ 0.61
TVP23B-206ENST00000574226 GPR20Q99678 358 aa18.88■□□□□ 0.61
TVP23B-206ENST00000574226 CYP46A1Q9Y6A2 500 aa18.88■□□□□ 0.61
TVP23B-206ENST00000574226 ESYT2A0FGR8 921 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 PRPF3O43395 683 aaKnown RBP18.87■□□□□ 0.61
TVP23B-206ENST00000574226 BAIAP3O94812 1187 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 CPA1P15085 419 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 ITGB5P18084 799 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 SCN5AQ14524 2016 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 LRRC8DQ7L1W4 858 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 DEFB128Q7Z7B8 93 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 PHOSPHO2Q8TCD6 241 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 KAT6AQ92794 2004 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 FAM161BQ96MY7 647 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 CTAGE1Q96RT6 745 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 CDX2Q99626 313 aaPredicted RBP18.87■□□□□ 0.61
TVP23B-206ENST00000574226 TTYH1Q9H313 450 aaPredicted RBP18.87■□□□□ 0.61
TVP23B-206ENST00000574226 ZSWIM6Q9HCJ5 1215 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 JADE2Q9NQC1 790 aa18.87■□□□□ 0.61
TVP23B-206ENST00000574226 CXXC1Q9P0U4 656 aaPredicted RBP18.87■□□□□ 0.61
TVP23B-206ENST00000574226 EMSYQ7Z589 1322 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 C17orf102A2RUQ5 167 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 ZBBXA8MT70 800 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 SORBS3O60504 671 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 CAND2O75155 1236 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 CKBP12277 381 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 KCNA2P16389 499 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 GNA11P29992 359 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 HOXC8P31273 242 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 SERINC5Q86VE9 423 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 PPP1R13LQ8WUF5 828 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 SEPT1Q8WYJ6 367 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 SLC9A7Q96T83 725 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
TVP23B-206ENST00000574226 PBX4Q9BYU1 374 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 FTOQ9C0B1 505 aaKnown RBP eCLIP18.86■□□□□ 0.61
TVP23B-206ENST00000574226 ZNF576Q9H609 170 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 C6orf50Q9HD87 102 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 DOCK5Q9H7D0 1870 aa18.86■□□□□ 0.61
TVP23B-206ENST00000574226 MYO9BQ13459 2157 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 EFCAB14O75071 495 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 ATP2A2P16615 1042 aaKnown RBP18.85■□□□□ 0.61
TVP23B-206ENST00000574226 IFNAR1P17181 557 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 CEP55Q53EZ4 464 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 TYW1BQ6NUM6 668 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 BICD2Q8TD16 824 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
TVP23B-206ENST00000574226 ATP6V0A1Q93050 837 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 VWCEQ96DN2 955 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 MXRA8Q9BRK3 442 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 ANO3Q9BYT9 981 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 ZMYND12Q9H0C1 365 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 PCDHA11Q9Y5I1 949 aa18.85■□□□□ 0.61
TVP23B-206ENST00000574226 SMIM10L2AP0DMW4 78 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 SMIM10L2BP0DMW5 78 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 SREBF1P36956 1147 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 CLK2P49760 499 aaKnown RBP18.84■□□□□ 0.61
TVP23B-206ENST00000574226 NIPA1Q7RTP0 329 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 FAM177A1Q8N128 213 aaPredicted RBP18.84■□□□□ 0.61
TVP23B-206ENST00000574226 SLC17A8Q8NDX2 589 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 CCDC148Q8NFR7 591 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 DHX38Q92620 1227 aaKnown RBP18.84■□□□□ 0.61
TVP23B-206ENST00000574226 ZNF274Q96GC6 653 aaPredicted RBP18.84■□□□□ 0.61
TVP23B-206ENST00000574226 BCAS3Q9H6U6 928 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 SLC28A3Q9HAS3 691 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 KCNH7Q9NS40 1196 aa18.84■□□□□ 0.61
TVP23B-206ENST00000574226 TET1Q8NFU7 2136 aa18.83■□□□□ 0.61
TVP23B-206ENST00000574226 NFASCO94856 1347 aa18.83■□□□□ 0.61
TVP23B-206ENST00000574226 NRCAMQ92823 1304 aa18.83■□□□□ 0.61
TVP23B-206ENST00000574226 ATP9AO75110 1047 aa18.83■□□□□ 0.6
TVP23B-206ENST00000574226 CXCL10P02778 98 aa18.83■□□□□ 0.6
TVP23B-206ENST00000574226 PDIA3P30101 505 aaKnown RBP18.83■□□□□ 0.6
TVP23B-206ENST00000574226 TCF7P36402 384 aaPredicted RBP18.83■□□□□ 0.6
TVP23B-206ENST00000574226 CNKSR3Q6P9H4 555 aa18.83■□□□□ 0.6
TVP23B-206ENST00000574226 CPLX2Q6PUV4 134 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms