RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 STXBP3O00186 592 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 ATP9AO75110 1047 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 ITGB5P18084 799 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 SP4Q02446 784 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 AFAP1L1Q8TED9 768 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 GPRASP2Q96D09 838 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 FTOQ9C0B1 505 aaKnown RBP eCLIP29.87■■■□□ 2.377e-6■■□□□ 12.9
NPLOC4-215ENST00000574095 ZNF576Q9H609 170 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 TUT1Q9H6E5 874 aaKnown RBP29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 RIC8AQ9NPQ8 531 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 PPP4R2Q9NY27 417 aa29.87■■■□□ 2.37
NPLOC4-215ENST00000574095 TET1Q8NFU7 2136 aa29.86■■■□□ 2.37
NPLOC4-215ENST00000574095 PSMA5P28066 241 aa29.86■■■□□ 2.37
NPLOC4-215ENST00000574095 GRIN2CQ14957 1233 aa29.86■■■□□ 2.37
NPLOC4-215ENST00000574095 PGBD1Q96JS3 809 aa29.86■■■□□ 2.37
NPLOC4-215ENST00000574095 USP26Q9BXU7 913 aa29.86■■■□□ 2.37
NPLOC4-215ENST00000574095 UBIAD1Q9Y5Z9 338 aa29.86■■■□□ 2.37
NPLOC4-215ENST00000574095 CDH23Q9H251 3354 aa29.86■■■□□ 2.37
NPLOC4-215ENST00000574095 SMCO2A6NFE2 343 aa29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 CKBP12277 381 aa29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 SELPP16109 830 aa29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 PTK7Q13308 1070 aa29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 UTP14CQ5TAP6 766 aaKnown RBP29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 PPP1R18Q6NYC8 613 aa29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 WNT8BQ93098 351 aa29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 BARHL2Q9NY43 387 aa29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 MSRAQ9UJ68 235 aa29.85■■■□□ 2.37
NPLOC4-215ENST00000574095 CCDC196A0A1B0GTZ2 297 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 ACTN1P12814 892 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 ADCY7P51828 1080 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 RABGGTBP53611 331 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 LRRC8DQ7L1W4 858 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 FBXL16Q8N461 479 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 GIMAP8Q8ND71 665 aaPredicted RBP29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 CDHR1Q96JP9 859 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 AGXT2Q9BYV1 514 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 EHMT1Q9H9B1 1298 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 PKD2L1Q9P0L9 805 aa29.84■■■□□ 2.37
NPLOC4-215ENST00000574095 hCG_1984214I3L0E3 225 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 KCNA2P16389 499 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 RBL2Q08999 1139 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 MTMR1Q13613 665 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 GPNMBQ14956 572 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 RAB30Q15771 203 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 TRIM50Q86XT4 487 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 ZNF713Q8N859 430 aaPredicted RBP29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 NKX2-4Q9H2Z4 354 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 JADE2Q9NQC1 790 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 TMEM260Q9NX78 707 aa29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 YBX2Q9Y2T7 364 aaKnown RBP29.83■■■□□ 2.37
NPLOC4-215ENST00000574095 EPB41L2O43491 1005 aaKnown RBP29.82■■■□□ 2.36
NPLOC4-215ENST00000574095 SMIM10L2AP0DMW4 78 aa29.82■■■□□ 2.36
NPLOC4-215ENST00000574095 SMIM10L2BP0DMW5 78 aa29.82■■■□□ 2.36
NPLOC4-215ENST00000574095 PFKFB3Q16875 520 aaPredicted RBP29.82■■■□□ 2.36
NPLOC4-215ENST00000574095 TRIM71Q2Q1W2 868 aaKnown RBP29.82■■■□□ 2.36
NPLOC4-215ENST00000574095 RNPEPQ9H4A4 650 aa29.82■■■□□ 2.36
NPLOC4-215ENST00000574095 C17orf102A2RUQ5 167 aa29.81■■■□□ 2.36
NPLOC4-215ENST00000574095 RBAK-RBAKDNI3L0D1 243 aa29.81■■■□□ 2.36
NPLOC4-215ENST00000574095 ATP2A2P16615 1042 aaKnown RBP29.81■■■□□ 2.36
NPLOC4-215ENST00000574095 ATP6V0A1Q93050 837 aa29.81■■■□□ 2.36
NPLOC4-215ENST00000574095 ANO3Q9BYT9 981 aa29.81■■■□□ 2.36
NPLOC4-215ENST00000574095 FOSP01100 380 aaPredicted RBP29.8■■■□□ 2.36
NPLOC4-215ENST00000574095 FOSL2P15408 326 aa29.8■■■□□ 2.36
NPLOC4-215ENST00000574095 ZNF618Q5T7W0 954 aa29.8■■■□□ 2.36
NPLOC4-215ENST00000574095 RUFY3Q7L099 469 aa29.8■■■□□ 2.36
NPLOC4-215ENST00000574095 CYP2W1Q8TAV3 490 aa29.8■■■□□ 2.36
NPLOC4-215ENST00000574095 MXRA8Q9BRK3 442 aa29.8■■■□□ 2.36
NPLOC4-215ENST00000574095 ZSWIM6Q9HCJ5 1215 aa29.8■■■□□ 2.36
NPLOC4-215ENST00000574095 NID2Q14112 1375 aa29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 MAFGO15525 162 aa29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 NBNO60934 754 aa29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 PPFIA3O75145 1194 aa29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 SCG2P13521 617 aa29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 MYOGP15173 224 aa29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 TCF7P36402 384 aaPredicted RBP29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 SERINC5Q86VE9 423 aa29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 PHKBQ93100 1093 aa29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 ZNF215Q9UL58 517 aaPredicted RBP29.79■■■□□ 2.36
NPLOC4-215ENST00000574095 GSTTP1A0A1W2PQM5 241 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 TREHO43280 583 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 PRPF3O43395 683 aaKnown RBP29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 HOXC8P31273 242 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 CLK2P49760 499 aaKnown RBP29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 CCT2P78371 535 aaKnown RBP29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 PKN1Q16512 942 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 ERICH6BQ5W0A0 696 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 TRAF7Q6Q0C0 670 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 TEX2Q8IWB9 1127 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 SEPT1Q8WYJ6 367 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 GLT8D2Q9H1C3 349 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 SLC28A3Q9HAS3 691 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 KCNH7Q9NS40 1196 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 SETD4Q9NVD3 440 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 EYSQ5T1H1 3165 aa29.78■■■□□ 2.36
NPLOC4-215ENST00000574095 PARNO95453 639 aaKnown RBP29.77■■■□□ 2.36
NPLOC4-215ENST00000574095 PDIA3P30101 505 aaKnown RBP29.77■■■□□ 2.36
NPLOC4-215ENST00000574095 THPOP40225 353 aa29.77■■■□□ 2.36
NPLOC4-215ENST00000574095 JAKMIP3Q5VZ66 844 aa29.77■■■□□ 2.36
NPLOC4-215ENST00000574095 MAFAQ8NHW3 353 aaPredicted RBP29.77■■■□□ 2.36
NPLOC4-215ENST00000574095 PCDHA11Q9Y5I1 949 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms