RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 PCNX4Q63HM2 1172 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 CNKSR3Q6P9H4 555 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 METTL7BQ6UX53 244 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 TUT1Q9H6E5 874 aaKnown RBP24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 TLL1O43897 1013 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 CXCL10P02778 98 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 SP4Q02446 784 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 XRRA1Q6P2D8 792 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 MICU3Q86XE3 530 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 SYMPKQ92797 1274 aaKnown RBP24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 ATP6V0A1Q93050 837 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 PSTPIP2Q9H939 334 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 REV3LO60673 3130 aa24.32■■□□□ 1.48
CHRNB1-206ENST00000574054 SMIM10L2AP0DMW4 78 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 SMIM10L2BP0DMW5 78 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 THPOP40225 353 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 TJAP1Q5JTD0 557 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 SYNE3Q6ZMZ3 975 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 TMTC3Q6ZXV5 915 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 TMCO2Q7Z6W1 182 aaPredicted RBP24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 NLRX1Q86UT6 975 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 SERINC5Q86VE9 423 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 FANCBQ8NB91 859 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 ZBED2Q9BTP6 218 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 THEGQ9P2T0 379 aa24.31■■□□□ 1.48
CHRNB1-206ENST00000574054 RBAK-RBAKDNI3L0D1 243 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 RFXAPO00287 272 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 ARHGEF15O94989 841 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 DEFB103AP81534 67 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 TAP1Q03518 808 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 UBE2SQ16763 222 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 TCTN1Q2MV58 587 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 UTP14CQ5TAP6 766 aaKnown RBP24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 TRAF7Q6Q0C0 670 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 HEATR3Q7Z4Q2 680 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 TRIM50Q86XT4 487 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 ARNTL2Q8WYA1 636 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 GPR20Q99678 358 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 USP26Q9BXU7 913 aa24.3■■□□□ 1.48
CHRNB1-206ENST00000574054 ABHD14A-ACY1A0A1B0GW23 586 aa24.29■■□□□ 1.48
CHRNB1-206ENST00000574054 IKBKEQ14164 716 aa24.29■■□□□ 1.48
CHRNB1-206ENST00000574054 MBTPS1Q14703 1052 aa24.29■■□□□ 1.48
CHRNB1-206ENST00000574054 ZNF215Q9UL58 517 aaPredicted RBP24.29■■□□□ 1.48
CHRNB1-206ENST00000574054 EPOPA6NHQ4 379 aa24.28■■□□□ 1.48
CHRNB1-206ENST00000574054 RSPH10B2B2RC85 870 aa24.28■■□□□ 1.48
CHRNB1-206ENST00000574054 GTPBP6O43824 516 aaPredicted RBP24.28■■□□□ 1.48
CHRNB1-206ENST00000574054 RSPH10BP0C881 870 aa24.28■■□□□ 1.48
CHRNB1-206ENST00000574054 SGMS1Q86VZ5 419 aa24.28■■□□□ 1.48
CHRNB1-206ENST00000574054 TCEANC2Q96MN5 208 aa24.28■■□□□ 1.48
CHRNB1-206ENST00000574054 NEK1Q96PY6 1258 aa24.28■■□□□ 1.48
CHRNB1-206ENST00000574054 TELO2Q9Y4R8 837 aa24.28■■□□□ 1.48
CHRNB1-206ENST00000574054 SPDYE3A6NKU9 549 aa24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 TREHO43280 583 aa24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 EFCAB14O75071 495 aa24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 LGR5O75473 907 aa24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 ATXN2LQ8WWM7 1075 aaKnown RBP24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 SENP7Q9BQF6 1050 aa24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 TSPYL2Q9H2G4 693 aaPredicted RBP24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 RNPEPQ9H4A4 650 aa24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 SETD4Q9NVD3 440 aa24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 EMSYQ7Z589 1322 aa24.27■■□□□ 1.48
CHRNB1-206ENST00000574054 DOCK5Q9H7D0 1870 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 LCHNA4D1U4 455 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 GNAT1P11488 350 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 HOXC8P31273 242 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 FAM117BQ6P1L5 589 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 APOA5Q6Q788 366 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 GIMAP8Q8ND71 665 aaPredicted RBP24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 GPRASP2Q96D09 838 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 CDHR1Q96JP9 859 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 PKD2L1Q9P0L9 805 aa24.26■■□□□ 1.47
CHRNB1-206ENST00000574054 PRRC2BQ5JSZ5 2229 aaKnown RBP24.25■■□□□ 1.47
CHRNB1-206ENST00000574054 CDC45O75419 566 aa24.25■■□□□ 1.47
CHRNB1-206ENST00000574054 CTSHP09668 335 aa24.25■■□□□ 1.47
CHRNB1-206ENST00000574054 SKIV2LQ15477 1246 aaKnown RBP24.25■■□□□ 1.47
CHRNB1-206ENST00000574054 RBM28Q9NW13 759 aaKnown RBP24.25■■□□□ 1.47
CHRNB1-206ENST00000574054 MTCH2Q9Y6C9 303 aa24.25■■□□□ 1.47
CHRNB1-206ENST00000574054 ITGB5P18084 799 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 MRPS5P82675 430 aaKnown RBP24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 ARHGAP4P98171 946 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 RTN1Q16799 776 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 DHX32Q7L7V1 743 aaKnown RBP24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 SPRED2Q7Z698 418 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 IL27Q8NEV9 243 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 DBF4BQ8NFT6 615 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 ASB2Q96Q27 587 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 RAD9AQ99638 391 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 EHMT1Q9H9B1 1298 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 PCDHA6Q9UN73 950 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 PCDHA8Q9Y5H6 950 aa24.24■■□□□ 1.47
CHRNB1-206ENST00000574054 PTPRSQ13332 1948 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 ZBTB43O43298 467 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 ATP9AO75110 1047 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 GJB5O95377 273 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 KCNA2P16389 499 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 NAPAP54920 295 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 EXOSC10Q01780 885 aaKnown RBP24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 MTMR1Q13613 665 aa24.23■■□□□ 1.47
CHRNB1-206ENST00000574054 ADCK5Q3MIX3 580 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms