RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 IFT20Q8IY31 132 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 EFCAB13Q8IY85 973 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 TBC1D5Q92609 795 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 EFCC1Q9HA90 598 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 EPB41L5Q9HCM4 733 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 ATP6V0A2Q9Y487 856 aa21.02■□□□□ 0.96
SCARF1-206ENST00000573852 EIF6P56537 245 aaKnown RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 NNTQ13423 1086 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 CLEC10AQ8IUN9 316 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 NELFCDQ8IXH7 590 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 SH2D3CQ8N5H7 860 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 NUCKS1Q9H1E3 243 aaKnown RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 CD209Q9NNX6 404 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 RNF14Q9UBS8 474 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 PACSIN2Q9UNF0 486 aaPredicted RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 HEXIM1O94992 359 aaKnown RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 KRT14P02533 472 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 SSBP05455 408 aaKnown RBP eCLIP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 GUCY2DQ02846 1103 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 ARID5AQ03989 594 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 PPP4R3AQ6IN85 833 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 IFT81Q8WYA0 676 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 ARHGEF1Q92888 912 aaKnown RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 UIMC1Q96RL1 719 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 MTMR4Q9NYA4 1195 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 DDX25Q9UHL0 483 aaKnown RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 A0A087X0T9 212 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 PPP1R11O60927 126 aaPredicted RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 FAM228BP0C875 321 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 HOXA7P31268 230 aaPredicted RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 GPSM2P81274 684 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 SKOR1P84550 965 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 CERS3Q8IU89 383 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 TRIM59Q8IWR1 403 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 IQCKQ8N0W5 287 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 CCDC43Q96MW1 224 aaKnown RBP21.01■□□□□ 0.95
SCARF1-206ENST00000573852 PACSIN1Q9BY11 444 aa21.01■□□□□ 0.95
SCARF1-206ENST00000573852 EBAG9O00559 213 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 ENOX2Q16206 610 aaKnown RBP21■□□□□ 0.95
SCARF1-206ENST00000573852 ASPRV1Q53RT3 343 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 KCTD16Q68DU8 428 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 NPHP3-ACAD11A0A0J9YXS1 232 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 E9PMD0 336 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 RNASE9P60153 205 aaKnown RBP21■□□□□ 0.95
SCARF1-206ENST00000573852 SLC18A3Q16572 532 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 MEI1Q5TIA1 1274 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 KRT12Q99456 494 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21■□□□□ 0.95
SCARF1-206ENST00000573852 JMJD4Q9H9V9 463 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 PCDHA2Q9Y5H9 948 aa21■□□□□ 0.95
SCARF1-206ENST00000573852 AHDC1Q5TGY3 1603 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-206ENST00000573852 A0A087WUV0 522 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-206ENST00000573852 CACNB1Q02641 598 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-206ENST00000573852 RAPGEF1Q13905 1077 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 SEPT2Q15019 361 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 TRADDQ15628 312 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 C15orf52Q6ZUT6 534 aaKnown RBP20.99■□□□□ 0.95
SCARF1-206ENST00000573852 TADA2BQ86TJ2 420 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 CEP63Q96MT8 703 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 ADAMTS1Q9UHI8 967 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 PCDHGC5Q9Y5F6 944 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.99■□□□□ 0.95
SCARF1-206ENST00000573852 FAM169AQ9Y6X4 670 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 ZNF233A6NK53 670 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 SNHG28P0DPA3 235 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 PLCG2P16885 1265 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 PDCLQ13371 301 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 KIAA0753Q2KHM9 967 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 CASKIN2Q8WXE0 1202 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 PIK3R5Q8WYR1 880 aa20.99■□□□□ 0.95
SCARF1-206ENST00000573852 INPP4AQ96PE3 977 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-206ENST00000573852 MYH7BA7E2Y1 1941 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 AKR1B1P15121 316 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 CLK2P49760 499 aaKnown RBP20.98■□□□□ 0.95
SCARF1-206ENST00000573852 FAM98CQ17RN3 349 aaKnown RBP20.98■□□□□ 0.95
SCARF1-206ENST00000573852 ADGRF4Q8IZF3 695 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 FAM133AQ8N9E0 248 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 PCDHA12Q9UN75 941 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 RTCBQ9Y3I0 505 aaKnown RBP20.98■□□□□ 0.95
SCARF1-206ENST00000573852 NHSQ6T4R5 1651 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 CPP00450 1065 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 ATP1A2P50993 1020 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 GUCY2FP51841 1108 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 PAK2Q13177 524 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 CFAP58Q5T655 872 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 POLD4Q9HCU8 107 aa20.98■□□□□ 0.95
SCARF1-206ENST00000573852 LUC7LQ9NQ29 371 aaKnown RBP20.98■□□□□ 0.95
SCARF1-206ENST00000573852 PNMA6FA0A0J9YX94 578 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 SHTN1A0MZ66 631 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 MARCH6O60337 910 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 UFL1O94874 794 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 MARSP56192 900 aaKnown RBP20.97■□□□□ 0.95
SCARF1-206ENST00000573852 KLHL30Q0D2K2 578 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 MFSD14BQ5SR56 506 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 TTBK2Q6IQ55 1244 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 SCFD1Q8WVM8 642 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 KCTD10Q9H3F6 313 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 BMP2KQ9NSY1 1161 aaPredicted RBP20.97■□□□□ 0.95
SCARF1-206ENST00000573852 KIAA1024Q9UPX6 916 aa20.97■□□□□ 0.95
SCARF1-206ENST00000573852 SAMM50Q9Y512 469 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms