RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PNMA1Q8ND90 353 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 PRSS33Q8NF86 280 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 PBXIP1Q96AQ6 731 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 FAM227BQ96M60 508 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 C11orf84Q9BUA3 381 aaPredicted RBP14.21□□□□□ -0.13
PRPF8-208ENST00000573716 KAT14Q9H8E8 782 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 MLXIPQ9HAP2 919 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 HELLSQ9NRZ9 838 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 TECTAO75443 2155 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 A0A0D9SFI3 127 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 LINC01565O15544 149 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 NDUFV1P49821 464 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 PTPN5P54829 565 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 SMAD4Q13485 552 aaKnown RBP14.2□□□□□ -0.14
PRPF8-208ENST00000573716 IER5LQ5T953 404 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 TBC1D10CQ8IV04 446 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 SUGP1Q8IWZ8 645 aaKnown RBP14.2□□□□□ -0.14
PRPF8-208ENST00000573716 ESR2Q92731 530 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 EDAQ92838 391 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 C16orf70Q9BSU1 422 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
PRPF8-208ENST00000573716 CD207Q9UJ71 328 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 C5orf42Q9H799 3197 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 TRIOO75962 3097 aa14.2□□□□□ -0.14
PRPF8-208ENST00000573716 CCDC171Q6TFL3 1326 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 TMEM221A6NGB7 291 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 H3BRB1 525 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 M0R296 226 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 TBX10O75333 385 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 HOXD8P13378 290 aaPredicted RBP14.19□□□□□ -0.14
PRPF8-208ENST00000573716 UBA1P22314 1058 aaKnown RBP14.19□□□□□ -0.14
PRPF8-208ENST00000573716 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
PRPF8-208ENST00000573716 BMPR1AP36894 532 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 CTC1Q2NKJ3 1217 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 KCNV1Q6PIU1 500 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 EVI5LQ96CN4 794 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 PDCD2LQ9BRP1 358 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 MAF1Q9H063 256 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 RNPEPQ9H4A4 650 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 TUT1Q9H6E5 874 aaKnown RBP14.19□□□□□ -0.14
PRPF8-208ENST00000573716 SETD4Q9NVD3 440 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 COL4A6Q14031 1691 aa14.19□□□□□ -0.14
PRPF8-208ENST00000573716 DOCK5Q9H7D0 1870 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 NEDD4P46934 1319 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 TRIM6-TRIM34B2RNG4 842 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 NOP56O00567 594 aaKnown RBP14.18□□□□□ -0.14
PRPF8-208ENST00000573716 ST18O60284 1047 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 RGS20O76081 388 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 LGALS2P05162 132 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 RB1P06400 928 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 PARP1P09874 1014 aaKnown RBP14.18□□□□□ -0.14
PRPF8-208ENST00000573716 SP2Q02086 613 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 ASPRV1Q53RT3 343 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 TRIM67Q6ZTA4 783 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 ZNF589Q86UQ0 364 aaPredicted RBP14.18□□□□□ -0.14
PRPF8-208ENST00000573716 IL31RAQ8NI17 732 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 APBB2Q92870 758 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 GPKOWQ92917 476 aaPredicted RBP eCLIP14.18□□□□□ -0.14
PRPF8-208ENST00000573716 LMAN2LQ9H0V9 348 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 RNF41Q9H4P4 317 aaPredicted RBP14.18□□□□□ -0.14
PRPF8-208ENST00000573716 JMJD4Q9H9V9 463 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 ALG13Q9NP73 1137 aaKnown RBP14.18□□□□□ -0.14
PRPF8-208ENST00000573716 FAM86C1Q9NVL1 165 aa14.18□□□□□ -0.14
PRPF8-208ENST00000573716 ADGRA3Q8IWK6 1321 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 KAT6AQ92794 2004 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 CAND2O75155 1236 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 KDM4AO75164 1064 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 GNAT1P11488 350 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 CCND2P30279 289 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 ARHGAP4P98171 946 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 NMIQ13287 307 aaPredicted RBP14.17□□□□□ -0.14
PRPF8-208ENST00000573716 BTG3Q14201 252 aaPredicted RBP14.17□□□□□ -0.14
PRPF8-208ENST00000573716 PGM5Q15124 567 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 FCHSD1Q86WN1 690 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 IQCA1Q86XH1 822 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 DGKHQ86XP1 1220 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 AMNQ9BXJ7 453 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 BCAS3Q9H6U6 928 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 RWDD3Q9Y3V2 267 aa14.17□□□□□ -0.14
PRPF8-208ENST00000573716 C5orf67F2Z3F1 127 aa14.16□□□□□ -0.14
PRPF8-208ENST00000573716 GHRP10912 638 aa14.16□□□□□ -0.14
PRPF8-208ENST00000573716 PCP11498 1178 aaKnown RBP14.16□□□□□ -0.14
PRPF8-208ENST00000573716 HSD17B4P51659 736 aa14.16□□□□□ -0.14
PRPF8-208ENST00000573716 SP4Q02446 784 aa14.16□□□□□ -0.14
PRPF8-208ENST00000573716 UTP14CQ5TAP6 766 aaKnown RBP14.16□□□□□ -0.14
PRPF8-208ENST00000573716 VSIG10LQ86VR7 867 aa14.16□□□□□ -0.14
PRPF8-208ENST00000573716 TRIM50Q86XT4 487 aa14.16□□□□□ -0.14
PRPF8-208ENST00000573716 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
PRPF8-208ENST00000573716 ZMYM6O95789 1325 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 KMT2EQ8IZD2 1858 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 OPLAHO14841 1288 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 GFRA3O60609 400 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 TGFB3P10600 412 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 HOXC8P31273 242 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 ZXDAP98168 799 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 ADAM15Q13444 863 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 ANKRD45Q5TZF3 282 aa14.15□□□□□ -0.14
PRPF8-208ENST00000573716 PPP2R3CQ969Q6 453 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms