RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 MXRA8Q9BRK3 442 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 JADE2Q9NQC1 790 aa18.01■□□□□ 0.47
CHD3-215ENST00000572750 SCN10AQ9Y5Y9 1956 aa18■□□□□ 0.47
CHD3-215ENST00000572750 ZEB2O60315 1214 aa18■□□□□ 0.47
CHD3-215ENST00000572750 KCNA2P16389 499 aa18■□□□□ 0.47
CHD3-215ENST00000572750 KRT2P35908 639 aa18■□□□□ 0.47
CHD3-215ENST00000572750 RTP1P59025 263 aa18■□□□□ 0.47
CHD3-215ENST00000572750 PSMC6P62333 389 aa18■□□□□ 0.47
CHD3-215ENST00000572750 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
CHD3-215ENST00000572750 PURAQ00577 322 aaKnown RBP18■□□□□ 0.47
CHD3-215ENST00000572750 GUCY1B3Q02153 619 aa18■□□□□ 0.47
CHD3-215ENST00000572750 SP4Q02446 784 aa18■□□□□ 0.47
CHD3-215ENST00000572750 LAMC2Q13753 1193 aa18■□□□□ 0.47
CHD3-215ENST00000572750 TRIM29Q14134 588 aa18■□□□□ 0.47
CHD3-215ENST00000572750 SNX17Q15036 470 aa18■□□□□ 0.47
CHD3-215ENST00000572750 HSDL1Q3SXM5 330 aa18■□□□□ 0.47
CHD3-215ENST00000572750 BRDTQ58F21 947 aaPredicted RBP18■□□□□ 0.47
CHD3-215ENST00000572750 KRT40Q6A162 431 aa18■□□□□ 0.47
CHD3-215ENST00000572750 SLC39A5Q6ZMH5 540 aa18■□□□□ 0.47
CHD3-215ENST00000572750 CYFIP1Q7L576 1253 aa18■□□□□ 0.47
CHD3-215ENST00000572750 PPTC7Q8NI37 304 aa18■□□□□ 0.47
CHD3-215ENST00000572750 TBCKQ8TEA7 893 aa18■□□□□ 0.47
CHD3-215ENST00000572750 CDHR1Q96JP9 859 aa18■□□□□ 0.47
CHD3-215ENST00000572750 SPATA33Q96N06 139 aa18■□□□□ 0.47
CHD3-215ENST00000572750 KCNH7Q9NS40 1196 aa18■□□□□ 0.47
CHD3-215ENST00000572750 ATP11BQ9Y2G3 1177 aa18■□□□□ 0.47
CHD3-215ENST00000572750 TELO2Q9Y4R8 837 aa18■□□□□ 0.47
CHD3-215ENST00000572750 IGLV3-22A0A075B6J6 115 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 ATP9AO75110 1047 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 MMP1P03956 469 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 CYP3A4P08684 503 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 ZNF286BP0CG31 522 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 NR5A1Q13285 461 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 NEDD9Q14511 834 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 TRIM60Q495X7 471 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 METTL7BQ6UX53 244 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 KRT25Q7Z3Z0 450 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 VTI1AQ96AJ9 217 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 UIMC1Q96RL1 719 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 CDX2Q99626 313 aaPredicted RBP17.99■□□□□ 0.47
CHD3-215ENST00000572750 MLXIPQ9HAP2 919 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 POLR3EQ9NVU0 708 aa17.99■□□□□ 0.47
CHD3-215ENST00000572750 CCDC194A0A1B0GVG4 234 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 FAM205CA6NFA0 338 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 EDIL3O43854 480 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 ARP10275 920 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 MDM2Q00987 491 aaPredicted RBP17.98■□□□□ 0.47
CHD3-215ENST00000572750 NONOQ15233 471 aaKnown RBP eCLIP17.98■□□□□ 0.47
CHD3-215ENST00000572750 INF2Q27J81 1249 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 PLA2G4DQ86XP0 818 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 MAFAQ8NHW3 353 aaPredicted RBP17.98■□□□□ 0.47
CHD3-215ENST00000572750 PPP1R13LQ8WUF5 828 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 C8orf76Q96K31 380 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 SENP7Q9BQF6 1050 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 AGO4Q9HCK5 861 aaKnown RBP17.98■□□□□ 0.47
CHD3-215ENST00000572750 BRMS1Q9HCU9 246 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 LTBP2Q14767 1821 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 ELP1O95163 1332 aa17.98■□□□□ 0.47
CHD3-215ENST00000572750 A0A0U1RQG5 324 aaPredicted RBP17.97■□□□□ 0.47
CHD3-215ENST00000572750 MEIS1O00470 390 aa17.97■□□□□ 0.47
CHD3-215ENST00000572750 NOP56O00567 594 aaKnown RBP17.97■□□□□ 0.47
CHD3-215ENST00000572750 PQBP1O60828 265 aaKnown RBP17.97■□□□□ 0.47
CHD3-215ENST00000572750 SETQ01105 290 aaPredicted RBP17.97■□□□□ 0.47
CHD3-215ENST00000572750 ITGB3BPQ13352 177 aaPredicted RBP17.97■□□□□ 0.47
CHD3-215ENST00000572750 DGKDQ16760 1214 aa17.97■□□□□ 0.47
CHD3-215ENST00000572750 PRR16Q569H4 304 aa17.97■□□□□ 0.47
CHD3-215ENST00000572750 EARS2Q5JPH6 523 aaKnown RBP17.97■□□□□ 0.47
CHD3-215ENST00000572750 PIK3AP1Q6ZUJ8 805 aa17.97■□□□□ 0.47
CHD3-215ENST00000572750 NIPA1Q7RTP0 329 aa17.97■□□□□ 0.47
CHD3-215ENST00000572750 DIS3L2Q8IYB7 885 aaKnown RBP17.97■□□□□ 0.47
CHD3-215ENST00000572750 TNFRSF25Q93038 417 aa17.97■□□□□ 0.47
CHD3-215ENST00000572750 LENG9Q96B70 501 aa17.97■□□□□ 0.47
CHD3-215ENST00000572750 MTG1Q9BT17 334 aaPredicted RBP17.97■□□□□ 0.47
CHD3-215ENST00000572750 GRIN2DO15399 1336 aa17.97■□□□□ 0.47
CHD3-215ENST00000572750 CABYRO75952 493 aa17.96■□□□□ 0.47
CHD3-215ENST00000572750 TDP2O95551 362 aa17.96■□□□□ 0.47
CHD3-215ENST00000572750 CHMP4BP1P59074 171 aa17.96■□□□□ 0.47
CHD3-215ENST00000572750 C1orf53Q5VUE5 145 aa17.96■□□□□ 0.47
CHD3-215ENST00000572750 GIMAP8Q8ND71 665 aaPredicted RBP17.96■□□□□ 0.47
CHD3-215ENST00000572750 BTBD18B2RXH4 712 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 MAFGO15525 162 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 HOXD8P13378 290 aaPredicted RBP17.95■□□□□ 0.46
CHD3-215ENST00000572750 GJB2P29033 226 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 CIITAP33076 1130 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 PLA2G5P39877 138 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 USP11P51784 963 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 TLE2Q04725 743 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 ITGA7Q13683 1181 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 TRIM50Q86XT4 487 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 KAT2BQ92831 832 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 GPR20Q99678 358 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 SDF4Q9BRK5 362 aa17.95■□□□□ 0.46
CHD3-215ENST00000572750 JPH1Q9HDC5 661 aaPredicted RBP17.95■□□□□ 0.46
CHD3-215ENST00000572750 DDX39AO00148 427 aaKnown RBP17.94■□□□□ 0.46
CHD3-215ENST00000572750 ARVCFO00192 962 aa17.94■□□□□ 0.46
CHD3-215ENST00000572750 KPNA6O60684 536 aa17.94■□□□□ 0.46
CHD3-215ENST00000572750 F2P00734 622 aa17.94■□□□□ 0.46
CHD3-215ENST00000572750 LGALS2P05162 132 aa17.94■□□□□ 0.46
CHD3-215ENST00000572750 LETM2Q2VYF4 491 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms