RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 CST5P28325 142 aaPredicted RBP8.9□□□□□ -0.98
SMG6-211ENST00000572369 GNA11P29992 359 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 RTP1P59025 263 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 NLRP5P59047 1200 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 CHMP4BP1P59074 171 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 NTRK3Q16288 839 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 PCNX4Q63HM2 1172 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 NLRX1Q86UT6 975 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 KLHDC9Q8NEP7 349 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 IL31RAQ8NI17 732 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 BICD2Q8TD16 824 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 MLXIPQ9HAP2 919 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 POLR3EQ9NVU0 708 aa8.9□□□□□ -0.98
SMG6-211ENST00000572369 SETXQ7Z333 2677 aaKnown RBP8.9□□□□□ -0.98
SMG6-211ENST00000572369 ANKRD11Q6UB99 2663 aaPredicted RBP8.89□□□□□ -0.99
SMG6-211ENST00000572369 CHD7Q9P2D1 2997 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 A0A0U1RQG5 324 aaPredicted RBP8.89□□□□□ -0.99
SMG6-211ENST00000572369 DCDC2CA8MYV0 355 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 PFKFB2O60825 505 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 PQBP1O60828 265 aaKnown RBP8.89□□□□□ -0.99
SMG6-211ENST00000572369 GGPS1O95749 300 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 ZNF76P36508 570 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 SCRN1Q12765 414 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 AP3B2Q13367 1082 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 PKN1Q16512 942 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 TRIM60Q495X7 471 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 JAKMIP3Q5VZ66 844 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 MCTP2Q6DN12 878 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 TYW1BQ6NUM6 668 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 XRRA1Q6P2D8 792 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 CXCL17Q6UXB2 119 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 REXO1Q8N1G1 1221 aaKnown RBP8.89□□□□□ -0.99
SMG6-211ENST00000572369 BADQ92934 168 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 PGBD1Q96JS3 809 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 ANO3Q9BYT9 981 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 PRDM5Q9NQX1 630 aaPredicted RBP8.89□□□□□ -0.99
SMG6-211ENST00000572369 TMEM260Q9NX78 707 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 VPS54Q9P1Q0 977 aa8.89□□□□□ -0.99
SMG6-211ENST00000572369 DDX41Q9UJV9 622 aaKnown RBP8.89□□□□□ -0.99
SMG6-211ENST00000572369 ELP1O95163 1332 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 FRMPD4Q14CM0 1322 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 MROH7Q68CQ1 1323 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.88□□□□□ -0.99
SMG6-211ENST00000572369 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.88□□□□□ -0.99
SMG6-211ENST00000572369 NOP56O00567 594 aaKnown RBP8.88□□□□□ -0.99
SMG6-211ENST00000572369 TLR3O15455 904 aaKnown RBP8.88□□□□□ -0.99
SMG6-211ENST00000572369 FIBPO43427 364 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 KPNA6O60684 536 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 TGFB3P10600 412 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 RBM25P49756 843 aaKnown RBP8.88□□□□□ -0.99
SMG6-211ENST00000572369 MRPS9P82933 396 aaKnown RBP8.88□□□□□ -0.99
SMG6-211ENST00000572369 ITGA7Q13683 1181 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 LAMC2Q13753 1193 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 ME3Q16798 604 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 CCSAPQ6IQ19 270 aaPredicted RBP8.88□□□□□ -0.99
SMG6-211ENST00000572369 CCDC62Q6P9F0 684 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 TEX2Q8IWB9 1127 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 NECAB1Q8N987 351 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 AFG1LQ8WV93 481 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 WASF1Q92558 559 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 IL17RAQ96F46 866 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 SPATA33Q96N06 139 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 ZMYND12Q9H0C1 365 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 CD320Q9NPF0 282 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 SH3GLB2Q9NR46 395 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 IGSF5Q9NSI5 407 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 PKD2L1Q9P0L9 805 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 LIMCH1Q9UPQ0 1083 aa8.88□□□□□ -0.99
SMG6-211ENST00000572369 UNC79Q9P2D8 2635 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 MYO15AQ9UKN7 3530 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 ZNF318Q5VUA4 2279 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 ESYT2A0FGR8 921 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 ARVCFO00192 962 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 CTAGE5O15320 804 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 LARGE1O95461 756 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 MMP3P08254 477 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 UBA1P22314 1058 aaKnown RBP8.87□□□□□ -0.99
SMG6-211ENST00000572369 PSMC6P62333 389 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 NKX3-2P78367 333 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 SP4Q02446 784 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 TLE2Q04725 743 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 ARHGAP1Q07960 439 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 MTMR1Q13613 665 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 NEDD9Q14511 834 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 RABEP1Q15276 862 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 DGKDQ16760 1214 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 FAM47CQ5HY64 1035 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 CYFIP1Q7L576 1253 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 GIMAP8Q8ND71 665 aaPredicted RBP8.87□□□□□ -0.99
SMG6-211ENST00000572369 GTF3C6Q969F1 213 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 GPRASP2Q96D09 838 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 CDHR1Q96JP9 859 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 ZSCAN31Q96LW9 406 aaPredicted RBP8.87□□□□□ -0.99
SMG6-211ENST00000572369 INPP4AQ96PE3 977 aaPredicted RBP8.87□□□□□ -0.99
SMG6-211ENST00000572369 MTG1Q9BT17 334 aaPredicted RBP8.87□□□□□ -0.99
SMG6-211ENST00000572369 ALG1Q9BT22 464 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 TMEM39AQ9NV64 488 aa8.87□□□□□ -0.99
SMG6-211ENST00000572369 ORC3Q9UBD5 711 aaPredicted RBP8.87□□□□□ -0.99
SMG6-211ENST00000572369 STK36Q9NRP7 1315 aa8.86□□□□□ -0.99
SMG6-211ENST00000572369 A6NJR5 290 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms