RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 KCNV1Q6PIU1 500 aa23.09■■□□□ 1.29
CCDC40-206ENST00000572083 NSUN3Q9H649 340 aaKnown RBP23.09■■□□□ 1.29
CCDC40-206ENST00000572083 ATG2AQ2TAZ0 1938 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.08■■□□□ 1.29
CCDC40-206ENST00000572083 H3BRB1 525 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 HOXC8P31273 242 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 MRE11P49959 708 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 GHRHRQ02643 423 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 STOX1Q6ZVD7 989 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 IFIH1Q9BYX4 1025 aaKnown RBP23.08■■□□□ 1.29
CCDC40-206ENST00000572083 TUT1Q9H6E5 874 aaKnown RBP23.08■■□□□ 1.29
CCDC40-206ENST00000572083 BCAS3Q9H6U6 928 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 MLXIPQ9HAP2 919 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 CLDND1Q9NY35 253 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 RALGAPA2Q2PPJ7 1873 aa23.08■■□□□ 1.29
CCDC40-206ENST00000572083 LGALS2P05162 132 aa23.07■■□□□ 1.28
CCDC40-206ENST00000572083 SDSP20132 328 aa23.07■■□□□ 1.28
CCDC40-206ENST00000572083 VSIG10LQ86VR7 867 aa23.07■■□□□ 1.28
CCDC40-206ENST00000572083 RNPEPQ9H4A4 650 aa23.07■■□□□ 1.28
CCDC40-206ENST00000572083 ZSWIM5Q9P217 1185 aa23.07■■□□□ 1.28
CCDC40-206ENST00000572083 POTEB3A0JP26 581 aa23.06■■□□□ 1.28
CCDC40-206ENST00000572083 CCND2P30279 289 aa23.06■■□□□ 1.28
CCDC40-206ENST00000572083 NT5C2P49902 561 aa23.06■■□□□ 1.28
CCDC40-206ENST00000572083 COL19A1Q14993 1142 aa23.06■■□□□ 1.28
CCDC40-206ENST00000572083 POTEBQ6S5H4 581 aa23.06■■□□□ 1.28
CCDC40-206ENST00000572083 LNPKQ9C0E8 428 aa23.06■■□□□ 1.28
CCDC40-206ENST00000572083 FAM50BQ9Y247 325 aa23.06■■□□□ 1.28
CCDC40-206ENST00000572083 PCDHA1Q9Y5I3 950 aa23.06■■□□□ 1.28
CCDC40-206ENST00000572083 ZBTB5O15062 677 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 TGFB3P10600 412 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 CTNNB1P35222 781 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 NHLH1Q02575 133 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 CLUL1Q15846 466 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 RPAINQ86UA6 219 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 HOMER1Q86YM7 354 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 FBXL18Q96ME1 805 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 UBAC1Q9BSL1 405 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 SETD4Q9NVD3 440 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 PRKAG3Q9UGI9 489 aa23.05■■□□□ 1.28
CCDC40-206ENST00000572083 KLRF2D3W0D1 207 aa23.04■■□□□ 1.28
CCDC40-206ENST00000572083 NOP56O00567 594 aaKnown RBP23.04■■□□□ 1.28
CCDC40-206ENST00000572083 IFIT1BQ5T764 474 aaKnown RBP23.04■■□□□ 1.28
CCDC40-206ENST00000572083 CWC27Q6UX04 472 aaKnown RBP23.04■■□□□ 1.28
CCDC40-206ENST00000572083 FCHSD1Q86WN1 690 aa23.04■■□□□ 1.28
CCDC40-206ENST00000572083 TRIM50Q86XT4 487 aa23.04■■□□□ 1.28
CCDC40-206ENST00000572083 ADHFE1Q8IWW8 467 aa23.04■■□□□ 1.28
CCDC40-206ENST00000572083 MTMR8Q96EF0 704 aa23.04■■□□□ 1.28
CCDC40-206ENST00000572083 MAP3K20Q9NYL2 800 aaKnown RBP23.04■■□□□ 1.28
CCDC40-206ENST00000572083 MAD2L2Q9UI95 211 aa23.04■■□□□ 1.28
CCDC40-206ENST00000572083 DOCK5Q9H7D0 1870 aa23.03■■□□□ 1.28
CCDC40-206ENST00000572083 C19orf67A6NJJ6 358 aa23.03■■□□□ 1.28
CCDC40-206ENST00000572083 CAND2O75155 1236 aa23.03■■□□□ 1.28
CCDC40-206ENST00000572083 CSPG5O95196 566 aa23.03■■□□□ 1.28
CCDC40-206ENST00000572083 IRS1P35568 1242 aa23.03■■□□□ 1.28
CCDC40-206ENST00000572083 LTBRP36941 435 aa23.03■■□□□ 1.28
CCDC40-206ENST00000572083 FIBCD1Q8N539 461 aa23.03■■□□□ 1.28
CCDC40-206ENST00000572083 MYO7AQ13402 2215 aa23.02■■□□□ 1.28
CCDC40-206ENST00000572083 IMMTQ16891 758 aaKnown RBP23.02■■□□□ 1.28
CCDC40-206ENST00000572083 HFE2Q6ZVN8 426 aa23.02■■□□□ 1.28
CCDC40-206ENST00000572083 APBB2Q92870 758 aa23.02■■□□□ 1.28
CCDC40-206ENST00000572083 SUPT16HQ9Y5B9 1047 aaKnown RBP23.02■■□□□ 1.28
CCDC40-206ENST00000572083 GCOM1H8Y6P7 765 aaPredicted RBP23.01■■□□□ 1.27
CCDC40-206ENST00000572083 POLR2MP0CAP2 368 aa23.01■■□□□ 1.27
CCDC40-206ENST00000572083 DLX2Q07687 328 aaPredicted RBP23.01■■□□□ 1.27
CCDC40-206ENST00000572083 HDAC1Q13547 482 aaPredicted RBP23.01■■□□□ 1.27
CCDC40-206ENST00000572083 CYFIP1Q7L576 1253 aa23.01■■□□□ 1.27
CCDC40-206ENST00000572083 IL17RAQ96F46 866 aa23.01■■□□□ 1.27
CCDC40-206ENST00000572083 USP26Q9BXU7 913 aa23.01■■□□□ 1.27
CCDC40-206ENST00000572083 KRT23Q9C075 422 aa23.01■■□□□ 1.27
CCDC40-206ENST00000572083 DIAPH3Q9NSV4 1193 aa23.01■■□□□ 1.27
CCDC40-206ENST00000572083 TELO2Q9Y4R8 837 aa23.01■■□□□ 1.27
CCDC40-206ENST00000572083 GRM6O15303 877 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 GNAT1P11488 350 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 ARHGAP4P98171 946 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 HYAL1Q12794 435 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 SLC35G1Q2M3R5 365 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 SAMD3Q8N6K7 520 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 PIGSQ96S52 555 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 MUTYHQ9UIF7 546 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 ADGRA3Q8IWK6 1321 aa23■■□□□ 1.27
CCDC40-206ENST00000572083 C5orf67F2Z3F1 127 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 LINC00271P0C7V0 271 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 GHRP10912 638 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 RRP1P56182 461 aaKnown RBP22.99■■□□□ 1.27
CCDC40-206ENST00000572083 MRPS9P82933 396 aaKnown RBP22.99■■□□□ 1.27
CCDC40-206ENST00000572083 SP4Q02446 784 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 SEMA3FQ13275 785 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 SEC23AQ15436 765 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 SMAD2Q15796 467 aaKnown RBP22.99■■□□□ 1.27
CCDC40-206ENST00000572083 CTC1Q2NKJ3 1217 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 GNPTABQ3T906 1256 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 UTP14CQ5TAP6 766 aaKnown RBP22.99■■□□□ 1.27
CCDC40-206ENST00000572083 METTL7BQ6UX53 244 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 LMBR1Q8WVP7 490 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 GPR20Q99678 358 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 C11orf84Q9BUA3 381 aaPredicted RBP22.99■■□□□ 1.27
CCDC40-206ENST00000572083 DSCC1Q9BVC3 393 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 CNNM2Q9H8M5 875 aa22.99■■□□□ 1.27
CCDC40-206ENST00000572083 ZNF318Q5VUA4 2279 aa22.98■■□□□ 1.27
CCDC40-206ENST00000572083 PALM3A6NDB9 673 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms