RNA–Protein interactions for RNA: ENST00000571961.7

JRK-203, Transcript of Jrk helix-turn-helix protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene JRK, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-203ENST00000571961 PACSIN2Q9UNF0 486 aaPredicted RBP17.72■□□□□ 0.43
JRK-203ENST00000571961 RTCBQ9Y3I0 505 aaKnown RBP17.72■□□□□ 0.43
JRK-203ENST00000571961 RBAK-RBAKDNI3L0D1 243 aa17.72■□□□□ 0.43
JRK-203ENST00000571961 KLRC1P26715 233 aa17.72■□□□□ 0.43
JRK-203ENST00000571961 ALS2CLQ60I27 953 aa17.72■□□□□ 0.43
JRK-203ENST00000571961 HAS1Q92839 578 aa17.72■□□□□ 0.43
JRK-203ENST00000571961 CAVIN3Q969G5 261 aa17.72■□□□□ 0.43
JRK-203ENST00000571961 ZIM3Q96PE6 472 aa17.72■□□□□ 0.43
JRK-203ENST00000571961 EPB41L5Q9HCM4 733 aa17.72■□□□□ 0.43
JRK-203ENST00000571961 NRAPQ86VF7 1730 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 hCG_1984214I3L0E3 225 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 UFL1O94874 794 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 FAM153BP0C7A2 387 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 GUCY2DQ02846 1103 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 RAPGEF1Q13905 1077 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 FAM153CQ494X1 144 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 TTC31Q49AM3 519 aaPredicted RBP17.71■□□□□ 0.43
JRK-203ENST00000571961 IFT20Q8IY31 132 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 ZNF713Q8N859 430 aaPredicted RBP17.71■□□□□ 0.43
JRK-203ENST00000571961 MTMR4Q9NYA4 1195 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 FAM153AQ9UHL3 310 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 TSKSQ9UJT2 592 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.43
JRK-203ENST00000571961 NPHP3-ACAD11A0A0J9YXS1 232 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 E9PMD0 336 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 HEXIM1O94992 359 aaKnown RBP17.71■□□□□ 0.43
JRK-203ENST00000571961 PICALMQ13492 652 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 RC3H1Q5TC82 1133 aaKnown RBP17.71■□□□□ 0.43
JRK-203ENST00000571961 KCTD16Q68DU8 428 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 ATP6V0A2Q9Y487 856 aa17.71■□□□□ 0.43
JRK-203ENST00000571961 GRIN2DO15399 1336 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 EIF3HO15372 352 aaKnown RBP eCLIP17.7■□□□□ 0.423e-6■■■■□ 19.6
JRK-203ENST00000571961 PLCG2P16885 1265 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 TNFRSF8P28908 595 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 NOVP48745 357 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 NAB2Q15742 525 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 GLE1Q53GS7 698 aaKnown RBP17.7■□□□□ 0.42
JRK-203ENST00000571961 MFSD14BQ5SR56 506 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 GBP6Q6ZN66 633 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 SH2D3CQ8N5H7 860 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 PPM1EQ8WY54 764 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 CCDC43Q96MW1 224 aaKnown RBP17.7■□□□□ 0.42
JRK-203ENST00000571961 PACSIN1Q9BY11 444 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.7■□□□□ 0.42
JRK-203ENST00000571961 CDK5RAP2Q96SN8 1893 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 A0A087X0T9 212 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 PPP1R11O60927 126 aaPredicted RBP17.7■□□□□ 0.42
JRK-203ENST00000571961 KRT14P02533 472 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 FAM228BP0C875 321 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 AKR1B1P15121 316 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 CERS3Q8IU89 383 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 FAM133AQ8N9E0 248 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 KRT12Q99456 494 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 NUCKS1Q9H1E3 243 aaKnown RBP17.7■□□□□ 0.42
JRK-203ENST00000571961 JMJD4Q9H9V9 463 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 BMP2KQ9NSY1 1161 aaPredicted RBP17.7■□□□□ 0.42
JRK-203ENST00000571961 ADAMTS1Q9UHI8 967 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 PCDHA12Q9UN75 941 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 COL24A1Q17RW2 1714 aa17.7■□□□□ 0.42
JRK-203ENST00000571961 EBAG9O00559 213 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 EPB41P11171 864 aaKnown RBP17.69■□□□□ 0.42
JRK-203ENST00000571961 GUCY2FP51841 1108 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 KIAA0753Q2KHM9 967 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 PPP4R3AQ6IN85 833 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 TTBK2Q6IQ55 1244 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
JRK-203ENST00000571961 ADGRF4Q8IZF3 695 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 GDF3Q9NR23 364 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 KIAA1024Q9UPX6 916 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 SLC16A2P36021 539 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 NOP2P46087 812 aaKnown RBP17.69■□□□□ 0.42
JRK-203ENST00000571961 EFCAB13Q8IY85 973 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 SYN2Q92777 582 aaPredicted RBP17.69■□□□□ 0.42
JRK-203ENST00000571961 POLD4Q9HCU8 107 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 LUC7LQ9NQ29 371 aaKnown RBP17.69■□□□□ 0.42
JRK-203ENST00000571961 RNF14Q9UBS8 474 aa17.69■□□□□ 0.42
JRK-203ENST00000571961 ATP1A2P50993 1020 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 KLHL30Q0D2K2 578 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 PDCLQ13371 301 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 SLC18A3Q16572 532 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 HERC4Q5GLZ8 1057 aaPredicted RBP17.68■□□□□ 0.42
JRK-203ENST00000571961 CFAP58Q5T655 872 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 TRIM59Q8IWR1 403 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 ZHX3Q9H4I2 956 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 PNMA6FA0A0J9YX94 578 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 SHTN1A0MZ66 631 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 NNTQ13423 1086 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 TRADDQ15628 312 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 CEP63Q96MT8 703 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 CCNL1Q9UK58 526 aaPredicted RBP17.68■□□□□ 0.42
JRK-203ENST00000571961 SAMM50Q9Y512 469 aa17.68■□□□□ 0.42
JRK-203ENST00000571961 EPS15P42566 896 aa17.67■□□□□ 0.42
JRK-203ENST00000571961 PAK2Q13177 524 aa17.67■□□□□ 0.42
JRK-203ENST00000571961 SEPT2Q15019 361 aa17.67■□□□□ 0.42
JRK-203ENST00000571961 MEI1Q5TIA1 1274 aa17.67■□□□□ 0.42
JRK-203ENST00000571961 FOXR2Q6PJQ5 311 aa17.67■□□□□ 0.42
JRK-203ENST00000571961 ARHGAP27Q6ZUM4 889 aa17.67■□□□□ 0.42
JRK-203ENST00000571961 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
JRK-203ENST00000571961 CNBD1Q8NA66 436 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms