RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ST3GAL1Q11201 340 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 NEDD9Q14511 834 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 MFSD10Q14728 455 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 ME3Q16798 604 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 KIAA0753Q2KHM9 967 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 MFSD5Q6N075 450 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 METTL7BQ6UX53 244 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 NLRX1Q86UT6 975 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 CRYGNQ8WXF5 182 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 GPRASP2Q96D09 838 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 SCLYQ96I15 445 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 WNT8AQ9H1J5 351 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 SLKQ9H2G2 1235 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 HIPK3Q9H422 1215 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 GJB4Q9NTQ9 266 aa11.71□□□□□ -0.53
GTF3C1-213ENST00000571886 GSTTP1A0A1W2PQM5 241 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 FAM86B1E9PN63 330 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 SLC34A2O95436 690 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 F2P00734 622 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 LGALS2P05162 132 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 FAM86B2P0C5J1 330 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 ARHGAP4P98171 946 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 FPGSQ05932 587 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 AP3B2Q13367 1082 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 MTMR1Q13613 665 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 NPY5RQ15761 445 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 UTP14CQ5TAP6 766 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 TRIM50Q86XT4 487 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 DHX38Q92620 1227 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 WNT8BQ93098 351 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.7□□□□□ -0.543e-6■■■□□ 18
GTF3C1-213ENST00000571886 SEZ6LQ9BYH1 1024 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 C6orf50Q9HD87 102 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 KCNH7Q9NS40 1196 aa11.7□□□□□ -0.54
GTF3C1-213ENST00000571886 TET1Q8NFU7 2136 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 M0R2N6 131 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 MEIS1O00470 390 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 CPLX1O14810 134 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 DEXIO95424 95 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 FDPSP14324 419 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 NLRP5P59047 1200 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 PTPN11Q06124 597 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 ITGB3BPQ13352 177 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 PTGISQ16647 500 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 LRIT3Q3SXY7 679 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 TMEM240Q5SV17 173 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 SESTD1Q86VW0 696 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 GLT8D2Q9H1C3 349 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 EHMT1Q9H9B1 1298 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 AGO4Q9HCK5 861 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 SH3GLB2Q9NR46 395 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 GTF2IRD1Q9UHL9 959 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 KCNJ14Q9UNX9 436 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 LAMA3Q16787 3333 aa11.69□□□□□ -0.54
GTF3C1-213ENST00000571886 IGLV3-22A0A075B6J6 115 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 H3BRB1 525 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 CYP3A4P08684 503 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 GNA11P29992 359 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 GPNMBQ14956 572 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 CEP55Q53EZ4 464 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 ZNF365Q70YC5 407 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 TRIM22Q8IYM9 498 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 REXO1Q8N1G1 1221 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 TMEM199Q8N511 208 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 C7orf31Q8N865 590 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 CCDC12Q8WUD4 166 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 PCYT2Q99447 389 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 RNPEPQ9H4A4 650 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 TUT1Q9H6E5 874 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 KAT6AQ92794 2004 aa11.68□□□□□ -0.54
GTF3C1-213ENST00000571886 MAFGO15525 162 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 DHX15O43143 795 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 JAK2O60674 1132 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 IQCF3P0C7M6 154 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 SMIM10L2AP0DMW4 78 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 SMIM10L2BP0DMW5 78 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 TCF7P36402 384 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 ZNF76P36508 570 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 PPIGQ13427 754 aaKnown RBP eCLIP11.67□□□□□ -0.546e-8■□□□□ 10.3
GTF3C1-213ENST00000571886 ANKRD1Q15327 319 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 TRIM71Q2Q1W2 868 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 FAM109BQ6ICB4 259 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 PLA2G4DQ86XP0 818 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 TEX2Q8IWB9 1127 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 NSUN7Q8NE18 718 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 SEPT1Q8WYJ6 367 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 GTF3C6Q969F1 213 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 CDHR1Q96JP9 859 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 KATNAL1Q9BW62 490 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 IL23AQ9NPF7 189 aa11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-213ENST00000571886 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms