RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CDK11AQ9UQ88 783 aaPredicted RBP6.06□□□□□ -1.44
NUP88-202ENST00000570937 MRPS23Q9Y3D9 190 aaKnown RBP6.06□□□□□ -1.44
NUP88-202ENST00000570937 ADAMTS20P59510 1910 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 CLASP1Q7Z460 1538 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 CUL7Q14999 1698 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 CCDC163A0A0D9SF12 145 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 AQP7O14520 342 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 MAFKO60675 156 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 PLA2G1BP04054 148 aaKnown RBP6.05□□□□□ -1.44
NUP88-202ENST00000570937 GRK2P25098 689 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 GRK3P35626 688 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 GABREP78334 506 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 C2orf27AQ580R0 203 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 HABP4Q5JVS0 413 aaKnown RBP6.05□□□□□ -1.44
NUP88-202ENST00000570937 FAM126BQ8IXS8 530 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 LINC01356Q8N9X3 169 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 SMARCC2Q8TAQ2 1214 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 JAM3Q9BX67 310 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 SMOC1Q9H4F8 434 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 NGRNQ9NPE2 291 aaKnown RBP6.05□□□□□ -1.44
NUP88-202ENST00000570937 PMF1-BGLAPU3KQ54 211 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 RIMBP3CA6NJZ7 1639 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 RIMBP3BA6NNM3 1639 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 RIMBP3Q9UFD9 1639 aa6.05□□□□□ -1.44
NUP88-202ENST00000570937 TCRBV5S2A0A599 114 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 KRIT1O00522 736 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 WNT9AO14904 365 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 SOD2P04179 222 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 C8BP07358 591 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 VWA3BQ502W6 1294 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 OTOP3Q7RTS5 596 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 SAPCD2Q86UD0 394 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 FAM9AQ8IZU1 332 aaPredicted RBP6.04□□□□□ -1.44
NUP88-202ENST00000570937 LILRB2Q8N423 598 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 LINC00482Q8N8I6 264 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 ZSWIM2Q8NEG5 633 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 PDGFDQ9GZP0 370 aaPredicted RBP6.04□□□□□ -1.44
NUP88-202ENST00000570937 TRAF6Q9Y4K3 522 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 PCDHB4Q9Y5E5 795 aa6.04□□□□□ -1.44
NUP88-202ENST00000570937 RAPGEF2Q9Y4G8 1499 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 SH3D21A4FU49 640 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 FAM47E-STBD1D6RA91 191 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 CYP2C8P10632 490 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 NAT1P18440 290 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 TRIM61Q5EBN2 209 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 ZC3H18Q86VM9 953 aaKnown RBP6.03□□□□□ -1.44
NUP88-202ENST00000570937 ARRDC4Q8NCT1 418 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 PIP4K2CQ8TBX8 421 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 ALG1Q9BT22 464 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 LNPKQ9C0E8 428 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 DTLQ9NZJ0 730 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 HSPBP1Q9NZL4 362 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 MYOTQ9UBF9 498 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 ASH2LQ9UBL3 628 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 KIAA0586Q9BVV6 1533 aa6.03□□□□□ -1.44
NUP88-202ENST00000570937 CEP170Q5SW79 1584 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 EEA1Q15075 1411 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 PRG4Q92954 1404 aaPredicted RBP6.02□□□□□ -1.45
NUP88-202ENST00000570937 FFAR3O14843 346 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 DLX2Q07687 328 aaPredicted RBP6.02□□□□□ -1.45
NUP88-202ENST00000570937 SPIRE1Q08AE8 756 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 PAK1Q13153 545 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 BMS1Q14692 1282 aaKnown RBP6.02□□□□□ -1.45
NUP88-202ENST00000570937 CR1LQ2VPA4 569 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 TRIM48Q8IWZ4 208 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 MARCH10Q8NA82 808 aaPredicted RBP6.02□□□□□ -1.45
NUP88-202ENST00000570937 TP53I13Q8NBR0 393 aaPredicted RBP6.02□□□□□ -1.45
NUP88-202ENST00000570937 TTLL11Q8NHH1 800 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 UHMK1Q8TAS1 419 aaKnown RBP6.02□□□□□ -1.45
NUP88-202ENST00000570937 NOX5Q96PH1 765 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 KCNC2Q96PR1 638 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 KRTAP17-1Q9BYP8 105 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 IPPKQ9H8X2 491 aa6.02□□□□□ -1.45
NUP88-202ENST00000570937 ARVCFO00192 962 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 KCNQ2O43526 872 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 TRIM13O60858 407 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 GNAT1P11488 350 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 CCDC144BQ3MJ40 725 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 CD300LDQ6UXZ3 194 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 FAM26EQ8N5C1 309 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 GSTCDQ8NEC7 633 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 DDX11Q96FC9 970 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 TOE1Q96GM8 510 aaKnown RBP6.01□□□□□ -1.45
NUP88-202ENST00000570937 MRFAP1L1Q96HT8 127 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 GORASP1Q9BQQ3 440 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 C11orf84Q9BUA3 381 aaPredicted RBP6.01□□□□□ -1.45
NUP88-202ENST00000570937 KRTAP4-5Q9BYR2 181 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 ZSWIM4Q9H7M6 989 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 RAPGEFL1Q9UHV5 662 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 NUB1Q9Y5A7 615 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 PTCH2Q9Y6C5 1203 aa6.01□□□□□ -1.45
NUP88-202ENST00000570937 RUSC2Q8N2Y8 1516 aa6□□□□□ -1.45
NUP88-202ENST00000570937 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6□□□□□ -1.45
NUP88-202ENST00000570937 EFCAB14O75071 495 aa6□□□□□ -1.45
NUP88-202ENST00000570937 EPHA5P54756 1037 aa6□□□□□ -1.45
NUP88-202ENST00000570937 NKX3-2P78367 333 aa6□□□□□ -1.45
NUP88-202ENST00000570937 VMACQ2NL98 169 aa6□□□□□ -1.45
NUP88-202ENST00000570937 MTDHQ86UE4 582 aaKnown RBP6□□□□□ -1.45
NUP88-202ENST00000570937 KYQ8NBH2 561 aa6□□□□□ -1.45
NUP88-202ENST00000570937 PCDH19Q8TAB3 1148 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms