RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 PTGISQ16647 500 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 CELF3Q5SZQ8 465 aaKnown RBP14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 MYSM1Q5VVJ2 828 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 TMTC3Q6ZXV5 915 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 SESTD1Q86VW0 696 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 PBX4Q9BYU1 374 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 MLXIPQ9HAP2 919 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 PLA2G2EQ9NZK7 142 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 CXXC1Q9P0U4 656 aaPredicted RBP14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 MYH6P13533 1939 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 PIK3CDO00329 1044 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 NOP56O00567 594 aaKnown RBP14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 PPFIA4O75335 1185 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 FOSL2P15408 326 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 PSEN2P49810 448 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 KIAA0753Q2KHM9 967 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 GDF6Q6KF10 455 aaPredicted RBP14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 APOA5Q6Q788 366 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 USP17L6PQ6QN14 398 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 DHX32Q7L7V1 743 aaKnown RBP14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 DEFB128Q7Z7B8 93 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 CCDC82Q8N4S0 544 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 FANCBQ8NB91 859 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 CAGE1Q8TC20 777 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 MYLIPQ8WY64 445 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 INPP4AQ96PE3 977 aaPredicted RBP14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 ALG1Q9BT22 464 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 RBM28Q9NW13 759 aaKnown RBP14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 HCSTQ9UBK5 93 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 GTF2IRD1Q9UHL9 959 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 MSRAQ9UJ68 235 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 SLC4A7Q9Y6M7 1214 aa14.23□□□□□ -0.13
CTDNEP1-205ENST00000570828 GRXCR1A8MXD5 290 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 MEIS2O14770 477 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 FIBPO43427 364 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 HMGB1P09429 215 aaKnown RBP14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 ACTN1P12814 892 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 HOXD8P13378 290 aaPredicted RBP14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 MRPS9P82933 396 aaKnown RBP14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 SP2Q02086 613 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 HSDL1Q3SXM5 330 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 TSGA10IPQ3SY00 556 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 PCNX4Q63HM2 1172 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 XRRA1Q6P2D8 792 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 HEATR3Q7Z4Q2 680 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 MAFAQ8NHW3 353 aaPredicted RBP14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 AFAP1L1Q8TED9 768 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 GPKOWQ92917 476 aaPredicted RBP eCLIP14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 TCEANC2Q96MN5 208 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 ZNF576Q9H609 170 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 PSTPIP2Q9H939 334 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 HDAC6Q9UBN7 1215 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 EYSQ5T1H1 3165 aa14.22□□□□□ -0.13
CTDNEP1-205ENST00000570828 hCG_1642624A0A1W2PR95 340 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 ZBTB43O43298 467 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 NEFLP07196 543 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 IQCF3P0C7M6 154 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 ICAM3P32942 547 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 FGD1P98174 961 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 NEDD9Q14511 834 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 RTN1Q16799 776 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 ADCK5Q3MIX3 580 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 METTL7BQ6UX53 244 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 NLRX1Q86UT6 975 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 BBXQ8WY36 941 aaPredicted RBP14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 FTOQ9C0B1 505 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 RTEL1Q9NZ71 1219 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 LHX6Q9UPM6 363 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 UNC80Q8N2C7 3258 aa14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 BAZ2BQ9UIF8 2168 aaKnown RBP14.21□□□□□ -0.13
CTDNEP1-205ENST00000570828 CNTNAP5Q8WYK1 1306 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 CHD9Q3L8U1 2897 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 C2orf72A6NCS6 295 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 SPDYE3A6NKU9 549 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 GOLGA8AA7E2F4 631 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 GOLGA8BA8MQT2 603 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 SPATA31C2B4DYI2 1134 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 HAS3O00219 553 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 SELPP16109 830 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 ATP2A2P16615 1042 aaKnown RBP14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 EXOSC10Q01780 885 aaKnown RBP14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 GRIN2CQ14957 1233 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 UBE2SQ16763 222 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 LRRC8DQ7L1W4 858 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 VWCEQ96DN2 955 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 CTAGE1Q96RT6 745 aa14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 NAP1L2Q9ULW6 460 aaPredicted RBP14.2□□□□□ -0.14
CTDNEP1-205ENST00000570828 KLF18A0A0U1RQI7 1052 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 LGALS2P05162 132 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 SEMA3FQ13275 785 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 PTK7Q13308 1070 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 CYFIP1Q7L576 1253 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 DHX38Q92620 1227 aaKnown RBP14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 CDHR1Q96JP9 859 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 NKX2-4Q9H2Z4 354 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 EHMT1Q9H9B1 1298 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 SLC28A3Q9HAS3 691 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 BRPF3Q9ULD4 1205 aa14.19□□□□□ -0.14
CTDNEP1-205ENST00000570828 KIAA1217Q5T5P2 1943 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms