RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 C7orf31Q8N865 590 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 SPPL3Q8TCT6 385 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 SUSD6Q92537 303 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 APPBP2Q92624 585 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 CNTNAP3BQ96NU0 1288 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 TMEM47Q9BQJ4 181 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 CNTNAP3Q9BZ76 1288 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMG6-205ENST00000570659 ADD3Q9UEY8 706 aaKnown RBP8.52□□□□□ -1.05
SMG6-205ENST00000570659 PLAGL2Q9UPG8 496 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 TTC3P53804 2025 aa8.52□□□□□ -1.05
SMG6-205ENST00000570659 SPTBN2O15020 2390 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 LOXHD1Q8IVV2 1947 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 COL4A3Q01955 1670 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 RNF113AO15541 343 aaKnown RBP8.51□□□□□ -1.05
SMG6-205ENST00000570659 PI15O43692 258 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 KDM4AO75164 1064 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 BRD1O95696 1058 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 MMP1P03956 469 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 PDHBP11177 359 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 EIF2AK2P19525 551 aaKnown RBP8.51□□□□□ -1.05
SMG6-205ENST00000570659 ID4P47928 161 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 NDUFV1P49821 464 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 FOXK2Q01167 660 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 COASYQ13057 564 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 SLC35G1Q2M3R5 365 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 KANK3Q6NY19 840 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 ADSSL1Q8N142 457 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 KBTBD3Q8NAB2 608 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 CLP1Q92989 425 aaKnown RBP8.51□□□□□ -1.05
SMG6-205ENST00000570659 ZNF689Q96CS4 500 aaPredicted RBP8.51□□□□□ -1.05
SMG6-205ENST00000570659 UBA5Q9GZZ9 404 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 S1PR5Q9H228 398 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 RNPEPQ9H4A4 650 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 CTNNA3Q9UI47 895 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 CACNA1GO43497 2377 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 TPRP12270 2363 aaKnown RBP8.51□□□□□ -1.05
SMG6-205ENST00000570659 ADGRA3Q8IWK6 1321 aa8.51□□□□□ -1.05
SMG6-205ENST00000570659 PATL2C9JE40 543 aaKnown RBP8.5□□□□□ -1.05
SMG6-205ENST00000570659 PPP1R11O60927 126 aaPredicted RBP8.5□□□□□ -1.05
SMG6-205ENST00000570659 APPP05067 770 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 SMIM10L2AP0DMW4 78 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 SMIM10L2BP0DMW5 78 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 CASTP20810 708 aaKnown RBP8.5□□□□□ -1.05
SMG6-205ENST00000570659 ICAM3P32942 547 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 MAP1BP46821 2468 aaKnown RBP8.5□□□□□ -1.05
SMG6-205ENST00000570659 ADAM17P78536 824 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 PTPN21Q16825 1174 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 CWF19L1Q69YN2 538 aaKnown RBP8.5□□□□□ -1.05
SMG6-205ENST00000570659 FIBCD1Q8N539 461 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 EFHBQ8N7U6 833 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 KLHL23Q8NBE8 558 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 ATP8B4Q8TF62 1192 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 DCAF4Q8WV16 495 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 EMID1Q96A84 441 aaPredicted RBP8.5□□□□□ -1.05
SMG6-205ENST00000570659 IL17RAQ96F46 866 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 DDRGK1Q96HY6 314 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 RIPOR3Q96MK2 946 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 SAMD11Q96NU1 681 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 POP1Q99575 1024 aaKnown RBP8.5□□□□□ -1.05
SMG6-205ENST00000570659 AGO3Q9H9G7 860 aaKnown RBP8.5□□□□□ -1.05
SMG6-205ENST00000570659 SETD4Q9NVD3 440 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 GPR179Q6PRD1 2367 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 RAD50Q92878 1312 aa8.5□□□□□ -1.05
SMG6-205ENST00000570659 LOC102724159A0A0B4J2E5 919 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 ENPP3O14638 875 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 EFCAB14O75071 495 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 ASGR2P07307 311 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 WEE2P0C1S8 567 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 SNHG28P0DPA3 235 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 GHRP10912 638 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 UBA1P22314 1058 aaKnown RBP8.49□□□□□ -1.05
SMG6-205ENST00000570659 ERVFC1P60507 584 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 ZNF543Q08ER8 600 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 MGAT3Q09327 533 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 APOBRQ0VD83 1088 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 SEMA3FQ13275 785 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 KCNC3Q14003 757 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 LPIN1Q14693 890 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 PWP2Q15269 919 aaKnown RBP8.49□□□□□ -1.05
SMG6-205ENST00000570659 DGKDQ16760 1214 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 PAN2Q504Q3 1202 aaKnown RBP8.49□□□□□ -1.05
SMG6-205ENST00000570659 SYCE2Q6PIF2 218 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 ERMP1Q7Z2K6 904 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 DNERQ8NFT8 737 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 PPTC7Q8NI37 304 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 ATP6V0A1Q93050 837 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 PHF7Q9BWX1 381 aaPredicted RBP8.49□□□□□ -1.05
SMG6-205ENST00000570659 ZBTB40Q9NUA8 1239 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 FAM50BQ9Y247 325 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 USP24Q9UPU5 2620 aa8.49□□□□□ -1.05
SMG6-205ENST00000570659 OTOGLQ3ZCN5 2332 aa8.48□□□□□ -1.05
SMG6-205ENST00000570659 CHD6Q8TD26 2715 aa8.48□□□□□ -1.05
SMG6-205ENST00000570659 TSPY2A6NKD2 308 aa8.48□□□□□ -1.05
SMG6-205ENST00000570659 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
SMG6-205ENST00000570659 DGKIO75912 1065 aa8.48□□□□□ -1.05
SMG6-205ENST00000570659 PARNO95453 639 aaKnown RBP8.48□□□□□ -1.05
SMG6-205ENST00000570659 GGPS1O95749 300 aa8.48□□□□□ -1.05
SMG6-205ENST00000570659 NPR3P17342 541 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms