RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 FMN2Q9NZ56 1722 aa4.75□□□□□ -1.65
CFDP1-210ENST00000570279 TUBGCP6Q96RT7 1819 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 CFAP65Q6ZU64 1925 aaKnown RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 LMO7Q8WWI1 1683 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 FAM237AA0A1B0GTK4 181 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 PTPDC1A2A3K4 754 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 CCDC66A2RUB6 948 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 GFRA2O00451 464 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 RNF113AO15541 343 aaKnown RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 KCNQ3O43525 872 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 PPP6R2O75170 966 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 CDKL5O76039 1030 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 PRNPP04156 253 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 CMA1P23946 247 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 PDIA3P30101 505 aaKnown RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 GRK4P32298 578 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 ME1P48163 572 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 SCRN1Q12765 414 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 TFCP2Q12800 502 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 TUBB2AQ13885 445 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 BMS1Q14692 1282 aaKnown RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 TSNAXIP1Q2TAA8 658 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 TMED8Q6PL24 325 aaPredicted RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 CPLX2Q6PUV4 134 aaKnown RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 ARHGAP27Q6ZUM4 889 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 COPS6Q7L5N1 327 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 LRP10Q7Z4F1 713 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 FILIP1Q7Z7B0 1213 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 ZNF589Q86UQ0 364 aaPredicted RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 VSIG10LQ86VR7 867 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 KRTAP1-3Q8IUG1 177 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 IFNL2Q8IZJ0 200 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 USHBP1Q8N6Y0 703 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 FAM181AQ8N9Y4 354 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 XAGE3Q8WTP9 111 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 JARID2Q92833 1246 aaPredicted RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 ZNF512BQ96KM6 892 aaPredicted RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 C16orf45Q96MC5 204 aaPredicted RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 SDF4Q9BRK5 362 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 MTA3Q9BTC8 594 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 TUBB2BQ9BVA1 445 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 FBRSQ9HAH7 460 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 PRDM10Q9NQV6 1147 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 ARGLU1Q9NWB6 273 aaPredicted RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 PAG1Q9NWQ8 432 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 FAM53CQ9NYF3 392 aa4.74□□□□□ -1.65
CFDP1-210ENST00000570279 HOOK1Q9UJC3 728 aaKnown RBP4.74□□□□□ -1.65
CFDP1-210ENST00000570279 ADAMTS7Q9UKP4 1686 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 PHLPP2Q6ZVD8 1323 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 KDM3BQ7LBC6 1761 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 ZNF609O15014 1411 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 A0A087WZG4 1122 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 CCDC69A6NI79 296 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 E7EWF7 191 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 SPTLC2O15270 562 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 ZSCAN12O43309 604 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 LRIG2O94898 1065 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 TUBBP07437 444 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 PHKG2P15735 406 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 ZNF16P17020 682 aaPredicted RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 SFPQP23246 707 aaKnown RBP eCLIP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 GBP2P32456 591 aaPredicted RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 RCAN1P53805 252 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 CASP7P55210 303 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 CBX1P83916 185 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 CCZ1BP86790 482 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 CCZ1P86791 482 aaPredicted RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 RPL6Q02878 288 aaKnown RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 LMNB2Q03252 620 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 PWP1Q13610 501 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 MRPL58Q14197 206 aaKnown RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 SLBPQ14493 270 aaKnown RBP eCLIP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 SLC39A14Q15043 492 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 TTF1Q15361 905 aaPredicted RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 SF3A1Q15459 793 aaKnown RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 NKG7Q16617 165 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 ATP2B3Q16720 1220 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 IMMTQ16891 758 aaKnown RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 PROSER3Q2NL68 480 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 CCDC158Q5M9N0 1113 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 JAKMIP3Q5VZ66 844 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 SYNE3Q6ZMZ3 975 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 RELL1Q8IUW5 271 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 DHX40Q8IX18 779 aaKnown RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 PLD6Q8N2A8 252 aaKnown RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 C17orf53Q8N3J3 647 aaPredicted RBP4.73□□□□□ -1.65
CFDP1-210ENST00000570279 FSIP1Q8NA03 581 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 LINC00301Q8NCQ3 95 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 CCDC191Q8NCU4 936 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 FBXO18Q8NFZ0 1043 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 WASF1Q92558 559 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 DDX11Q96FC9 970 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 CCDC34Q96HJ3 373 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 RHOVQ96L33 236 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 TMEM74Q96NL1 305 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 MPHOSPH8Q99549 860 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 MYD88Q99836 296 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 RSRP1Q9BUV0 290 aa4.73□□□□□ -1.65
CFDP1-210ENST00000570279 TUBE1Q9UJT0 475 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms