RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 ANKRD33Q7Z3H0 272 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 LENG9Q96B70 501 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 MTG1Q9BT17 334 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 AGO4Q9HCK5 861 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 TMEM39AQ9NV64 488 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 HDAC6Q9UBN7 1215 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 PCDHA4Q9UN74 947 aa11.21□□□□□ -0.61
GTF3C1-212ENST00000570129 SOX1O00570 391 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 NKRFO15226 690 aaKnown RBP eCLIP11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 FIBPO43427 364 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 HOXD8P13378 290 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 CAPN2P17655 700 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 CPT1AP50416 773 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 CCL23P55773 120 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 MTMR1Q13613 665 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 INF2Q27J81 1249 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 CEP55Q53EZ4 464 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 C1orf53Q5VUE5 145 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 PLA2G4DQ86XP0 818 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 TRIM22Q8IYM9 498 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 PPTC7Q8NI37 304 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 TBCKQ8TEA7 893 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 DHX38Q92620 1227 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 TNFRSF25Q93038 417 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 EMID1Q96A84 441 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 TMX3Q96JJ7 454 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 RNPEPQ9H4A4 650 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 SH3GLB2Q9NR46 395 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 TBX21Q9UL17 535 aa11.2□□□□□ -0.62
GTF3C1-212ENST00000570129 DOCK5Q9H7D0 1870 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 BTBD18B2RXH4 712 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 hCG_1984214I3L0E3 225 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 HAS3O00219 553 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 KIAA0355O15063 1070 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 FOSP01100 380 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 LGALS2P05162 132 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 CYP3A4P08684 503 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 CLTBP09497 229 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 ACRP10323 421 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 MARK3P27448 753 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 ZNF76P36508 570 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 MFSD10Q14728 455 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 KIAA0753Q2KHM9 967 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 TCTN1Q2MV58 587 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 PRR16Q569H4 304 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 KRT40Q6A162 431 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 ZNF713Q8N859 430 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 GPRASP2Q96D09 838 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 SCLYQ96I15 445 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 WNT8AQ9H1J5 351 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 POLR3EQ9NVU0 708 aa11.19□□□□□ -0.62
GTF3C1-212ENST00000570129 STK36Q9NRP7 1315 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 KIAA1217Q5T5P2 1943 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 DCDC2CA8MYV0 355 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 KIF28PB7ZC32 967 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 MSH4O15457 936 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 SLC37A4O43826 429 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 ZEB2O60315 1214 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 PPFIA4O75335 1185 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 TGFB3P10600 412 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 AP3B2Q13367 1082 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 GPNMBQ14956 572 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 RABEP1Q15276 862 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 SHHQ15465 462 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 DGKDQ16760 1214 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 GNPTABQ3T906 1256 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 HABP4Q5JVS0 413 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 XRRA1Q6P2D8 792 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 CPLX2Q6PUV4 134 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 METTL7BQ6UX53 244 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 PIK3AP1Q6ZUJ8 805 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 TRAPPC12Q8WVT3 735 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 NOC4LQ9BVI4 516 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 SETD4Q9NVD3 440 aa11.18□□□□□ -0.62
GTF3C1-212ENST00000570129 STAM2O75886 525 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 CABYRO75952 493 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 F2P00734 622 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 CSF2RAP15509 400 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 ATP4AP20648 1035 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 GNA11P29992 359 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 CIITAP33076 1130 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 TCF7P36402 384 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 ACTR2P61160 394 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 NEDD9Q14511 834 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 DAGLBQ8NCG7 672 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 TOX2Q96NM4 488 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 SENP7Q9BQF6 1050 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 MYH7BA7E2Y1 1941 aa11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 LAMA2P24043 3122 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-212ENST00000570129 H3BRB1 525 aa11.16□□□□□ -0.62
GTF3C1-212ENST00000570129 TREHO43280 583 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms