RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CPLX1O14810 134 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 PFKFB2O60825 505 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 LARGE1O95461 756 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 STK3Q13188 491 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 SEMA3FQ13275 785 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 MTMR1Q13613 665 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 PTGISQ16647 500 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 METTL7BQ6UX53 244 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 TEX2Q8IWB9 1127 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 RETREG2Q8NC44 543 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-225ENST00000569245 GPRASP2Q96D09 838 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 PKD2L1Q9P0L9 805 aa16.53■□□□□ 0.24
COMMD4-225ENST00000569245 NID2Q14112 1375 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 LTBP2Q14767 1821 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 F2P00734 622 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 ITGB5P18084 799 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 ZNF76P36508 570 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 GDF6Q6KF10 455 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-225ENST00000569245 TRIM22Q8IYM9 498 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
COMMD4-225ENST00000569245 SCLYQ96I15 445 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 SENP7Q9BQF6 1050 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.52■□□□□ 0.24
COMMD4-225ENST00000569245 C6orf50Q9HD87 102 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 IL23AQ9NPF7 189 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 TMEM260Q9NX78 707 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 HDAC6Q9UBN7 1215 aa16.52■□□□□ 0.24
COMMD4-225ENST00000569245 HOXD8P13378 290 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-225ENST00000569245 IFNAR1P17181 557 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 SSRP1Q08945 709 aaKnown RBP16.51■□□□□ 0.23
COMMD4-225ENST00000569245 AP3B2Q13367 1082 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 BFSP2Q13515 415 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 NTRK3Q16288 839 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 PKN1Q16512 942 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 UTP14CQ5TAP6 766 aaKnown RBP16.51■□□□□ 0.23
COMMD4-225ENST00000569245 JAKMIP3Q5VZ66 844 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 GPR153Q6NV75 609 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 PSRC1Q6PGN9 363 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-225ENST00000569245 CPLX2Q6PUV4 134 aaKnown RBP16.51■□□□□ 0.23
COMMD4-225ENST00000569245 ZNF365Q70YC5 407 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 C16orf59Q7L2K0 433 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 SESTD1Q86VW0 696 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 RPUSD2Q8IZ73 545 aaKnown RBP16.51■□□□□ 0.23
COMMD4-225ENST00000569245 DEFB123Q8N688 67 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 GPR20Q99678 358 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 RNF26Q9BY78 433 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-225ENST00000569245 ANO3Q9BYT9 981 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 WNT8AQ9H1J5 351 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 JADE2Q9NQC1 790 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 UBIAD1Q9Y5Z9 338 aa16.51■□□□□ 0.23
COMMD4-225ENST00000569245 H3BRB1 525 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 MAFGO15525 162 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 ATP9AO75110 1047 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 FGBP02675 491 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 LGALS2P05162 132 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 GNA11P29992 359 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 ST3GAL1Q11201 340 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 TMEM240Q5SV17 173 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 Q7L0L9 218 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 MXRA8Q9BRK3 442 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 C16orf70Q9BSU1 422 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-225ENST00000569245 TUT1Q9H6E5 874 aaKnown RBP16.5■□□□□ 0.23
COMMD4-225ENST00000569245 GTF2IRD1Q9UHL9 959 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 KIAA1217Q5T5P2 1943 aa16.5■□□□□ 0.23
COMMD4-225ENST00000569245 HAS3O00219 553 aa16.49■□□□□ 0.23
COMMD4-225ENST00000569245 KCNA2P16389 499 aa16.49■□□□□ 0.23
COMMD4-225ENST00000569245 DEFB128Q7Z7B8 93 aa16.49■□□□□ 0.23
COMMD4-225ENST00000569245 REXO1Q8N1G1 1221 aaKnown RBP16.49■□□□□ 0.23
COMMD4-225ENST00000569245 CCDC148Q8NFR7 591 aa16.49■□□□□ 0.23
COMMD4-225ENST00000569245 BICD2Q8TD16 824 aa16.49■□□□□ 0.23
COMMD4-225ENST00000569245 MTIF3Q9H2K0 278 aaKnown RBP16.49■□□□□ 0.23
COMMD4-225ENST00000569245 ESYT2A0FGR8 921 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 SREBF1P36956 1147 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 CLK2P49760 499 aaKnown RBP16.48■□□□□ 0.23
COMMD4-225ENST00000569245 SMAD3P84022 425 aaKnown RBP16.48■□□□□ 0.23
COMMD4-225ENST00000569245 ARHGAP4P98171 946 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 SCRN1Q12765 414 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 OTOP2Q7RTS6 562 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 NECAB1Q8N987 351 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 SDF4Q9BRK5 362 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
COMMD4-225ENST00000569245 KCNH7Q9NS40 1196 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 VPS54Q9P1Q0 977 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 ZNF215Q9UL58 517 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-225ENST00000569245 TELO2Q9Y4R8 837 aa16.48■□□□□ 0.23
COMMD4-225ENST00000569245 SCN10AQ9Y5Y9 1956 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-225ENST00000569245 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-225ENST00000569245 C17orf102A2RUQ5 167 aa16.47■□□□□ 0.23
COMMD4-225ENST00000569245 HSP90AA1P07900 732 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms