RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 LGR5O75473 907 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 GJB5O95377 273 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 RSPH10BP0C881 870 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 SMARCA1P28370 1054 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 THPOP40225 353 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 IRX6P78412 446 aaPredicted RBP15.76■□□□□ 0.11
CNOT1-215ENST00000569020 MRPS9P82933 396 aaKnown RBP15.76■□□□□ 0.11
CNOT1-215ENST00000569020 GRB10Q13322 594 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 HIC1Q14526 733 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 TRAF7Q6Q0C0 670 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 SERINC5Q86VE9 423 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 ZNF654Q8IZM8 581 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 TMTC2Q8N394 836 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 INPP4AQ96PE3 977 aaPredicted RBP15.76■□□□□ 0.11
CNOT1-215ENST00000569020 RAD9AQ99638 391 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 LY9Q9HBG7 655 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 RTEL1Q9NZ71 1219 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 COG5Q9UP83 839 aa15.76■□□□□ 0.11
CNOT1-215ENST00000569020 SPTBN5Q9NRC6 3674 aaKnown RBP15.76■□□□□ 0.11
CNOT1-215ENST00000569020 PRRC2BQ5JSZ5 2229 aaKnown RBP15.75■□□□□ 0.11
CNOT1-215ENST00000569020 LCHNA4D1U4 455 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 CCDC69A6NI79 296 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 SPATA31C2B4DYI2 1134 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 SMIM10L2AP0DMW4 78 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 SMIM10L2BP0DMW5 78 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 TFF2Q03403 129 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 TCTN1Q2MV58 587 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 KRT40Q6A162 431 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 METTL7BQ6UX53 244 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 NFXL1Q6ZNB6 911 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 CYFIP1Q7L576 1253 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 LZTS2Q9BRK4 669 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 MYL10Q9BUA6 226 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 RNPEPQ9H4A4 650 aa15.75■□□□□ 0.11
CNOT1-215ENST00000569020 PRC1O43663 620 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 AMHP03971 560 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 GNAT1P11488 350 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 BMP1P13497 986 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 MCM5P33992 734 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 GNAQP50148 359 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 MBTPS1Q14703 1052 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 PCNX4Q63HM2 1172 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 XRRA1Q6P2D8 792 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 USP17L6PQ6QN14 398 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 SPRED2Q7Z698 418 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 NLRX1Q86UT6 975 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 DBF4BQ8NFT6 615 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 TMEM87BQ96K49 555 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 TGS1Q96RS0 853 aaKnown RBP15.74■□□□□ 0.11
CNOT1-215ENST00000569020 BCAS3Q9H6U6 928 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 LMCD1Q9NZU5 365 aa15.74■□□□□ 0.11
CNOT1-215ENST00000569020 ZNF215Q9UL58 517 aaPredicted RBP15.74■□□□□ 0.11
CNOT1-215ENST00000569020 CHD7Q9P2D1 2997 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 PIK3CDO00329 1044 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 TREHO43280 583 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 LPXNO60711 386 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 CAND2O75155 1236 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 CALM1P0DP23 149 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 CALM2P0DP24 149 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 CALM3P0DP25 149 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 HOXC8P31273 242 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 FAM117BQ6P1L5 589 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 GIMAP8Q8ND71 665 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-215ENST00000569020 GDPD5Q8WTR4 605 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 GPR20Q99678 358 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 SENP7Q9BQF6 1050 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 MTUS1Q9ULD2 1270 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 INSL6Q9Y581 213 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 NLRC5Q86WI3 1866 aa15.73■□□□□ 0.11
CNOT1-215ENST00000569020 LINC01553A4QN01 128 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 MEIS2O14770 477 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 KCNQ1P51787 676 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 ERVK-21P61565 698 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 SEMA3FQ13275 785 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 PLEKHG4Q58EX7 1191 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 UTP14CQ5TAP6 766 aaKnown RBP15.72■□□□□ 0.11
CNOT1-215ENST00000569020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.72■□□□□ 0.11
CNOT1-215ENST00000569020 MYOCDQ8IZQ8 938 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 SEPT8Q92599 483 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 HLA-CQ95604 372 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 SUGCTQ9HAC7 445 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 SETD4Q9NVD3 440 aa15.72■□□□□ 0.11
CNOT1-215ENST00000569020 SH2B2O14492 632 aaPredicted RBP15.71■□□□□ 0.11
CNOT1-215ENST00000569020 PLEKHA8P1O95397 391 aa15.71■□□□□ 0.11
CNOT1-215ENST00000569020 LIFRP42702 1097 aa15.71■□□□□ 0.11
CNOT1-215ENST00000569020 SP4Q02446 784 aa15.71■□□□□ 0.11
CNOT1-215ENST00000569020 SRBD1Q8N5C6 995 aaKnown RBP15.71■□□□□ 0.11
CNOT1-215ENST00000569020 CDHR1Q96JP9 859 aa15.71■□□□□ 0.11
CNOT1-215ENST00000569020 LSG1Q9H089 658 aaKnown RBP15.71■□□□□ 0.11
CNOT1-215ENST00000569020 PSTPIP2Q9H939 334 aa15.71■□□□□ 0.11
CNOT1-215ENST00000569020 SLC12A7Q9Y666 1083 aa15.71■□□□□ 0.11
CNOT1-215ENST00000569020 RALGAPA2Q2PPJ7 1873 aa15.7■□□□□ 0.1
CNOT1-215ENST00000569020 CTSHP09668 335 aa15.7■□□□□ 0.1
CNOT1-215ENST00000569020 RXRAP19793 462 aa15.7■□□□□ 0.1
CNOT1-215ENST00000569020 ARHGAP4P98171 946 aa15.7■□□□□ 0.1
CNOT1-215ENST00000569020 TRIM50Q86XT4 487 aa15.7■□□□□ 0.1
CNOT1-215ENST00000569020 CMTR1Q8N1G2 835 aaKnown RBP15.7■□□□□ 0.1
CNOT1-215ENST00000569020 APBB2Q92870 758 aa15.7■□□□□ 0.1
CNOT1-215ENST00000569020 GPRASP2Q96D09 838 aa15.7■□□□□ 0.1
CNOT1-215ENST00000569020 NECAB3Q96P71 396 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms