RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PIK3R2O00459 728 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 VAMP4O75379 141 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 HMGCRP04035 888 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 PRRT3Q5FWE3 981 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 MAP4K3Q8IVH8 894 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 SCYL3Q8IZE3 742 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 VGLL2Q8N8G2 317 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 GRIN3AQ8TCU5 1115 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 UBASH3BQ8TF42 649 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 SUCLG2Q96I99 432 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 GUCD1Q96NT3 240 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 USP40Q9NVE5 1235 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 DAGLAQ9Y4D2 1042 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 ATRNL1Q5VV63 1379 aa7.02□□□□□ -1.29
CDH13-211ENST00000568770 RPTORQ8N122 1335 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 FANCIQ9NVI1 1328 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 CDK5RAP2Q96SN8 1893 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 TRIM75PA6NK02 468 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 ALX3O95076 343 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 NBPF7P0C2Y1 421 aaPredicted RBP7.01□□□□□ -1.29
CDH13-211ENST00000568770 SPATA31C1P0DKV0 1188 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 MAOBP27338 520 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 ARL4DP49703 201 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 ST13P50502 369 aaKnown RBP7.01□□□□□ -1.29
CDH13-211ENST00000568770 CCDC85BQ15834 202 aaPredicted RBP7.01□□□□□ -1.29
CDH13-211ENST00000568770 TREML2Q5T2D2 321 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 SLC4A10Q6U841 1118 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 WDR66Q8TBY9 1149 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 BICC1Q9H694 974 aaKnown RBP7.01□□□□□ -1.29
CDH13-211ENST00000568770 SRA1Q9HD15 236 aaKnown RBP7.01□□□□□ -1.29
CDH13-211ENST00000568770 COPRSQ9NQ92 184 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.01□□□□□ -1.29
CDH13-211ENST00000568770 AGTPBP1Q9UPW5 1226 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 REV3LO60673 3130 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 TTC28Q96AY4 2481 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 PFASO15067 1338 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 IL16Q14005 1332 aa7.01□□□□□ -1.29
CDH13-211ENST00000568770 COL2A1P02458 1487 aaPredicted RBP7□□□□□ -1.29
CDH13-211ENST00000568770 RLFQ13129 1914 aa7□□□□□ -1.29
CDH13-211ENST00000568770 LOC100289279A0A1B0GTE1 492 aa7□□□□□ -1.29
CDH13-211ENST00000568770 ALDH1L1O75891 902 aa7□□□□□ -1.29
CDH13-211ENST00000568770 IFIT1P09914 478 aaKnown RBP7□□□□□ -1.29
CDH13-211ENST00000568770 PRDX5P30044 214 aa7□□□□□ -1.29
CDH13-211ENST00000568770 ZEB1P37275 1124 aaPredicted RBP7□□□□□ -1.29
CDH13-211ENST00000568770 RGS3P49796 1198 aa7□□□□□ -1.29
CDH13-211ENST00000568770 FANCCQ00597 558 aa7□□□□□ -1.29
CDH13-211ENST00000568770 KCNMA1Q12791 1236 aa7□□□□□ -1.29
CDH13-211ENST00000568770 PUM3Q15397 648 aaKnown RBP7□□□□□ -1.29
CDH13-211ENST00000568770 FAM110CQ1W6H9 321 aa7□□□□□ -1.29
CDH13-211ENST00000568770 RABL6Q3YEC7 729 aaPredicted RBP7□□□□□ -1.29
CDH13-211ENST00000568770 IGF2-ASQ6U949 168 aa7□□□□□ -1.29
CDH13-211ENST00000568770 KIAA1211Q6ZU35 1233 aa7□□□□□ -1.29
CDH13-211ENST00000568770 SV2BQ7L1I2 683 aa7□□□□□ -1.29
CDH13-211ENST00000568770 PDZD3Q86UT5 571 aa7□□□□□ -1.29
CDH13-211ENST00000568770 CCDC84Q86UT8 332 aaPredicted RBP7□□□□□ -1.29
CDH13-211ENST00000568770 SULF2Q8IWU5 870 aa7□□□□□ -1.29
CDH13-211ENST00000568770 AGGF1Q8N302 714 aaeCLIP7□□□□□ -1.29
CDH13-211ENST00000568770 KLHDC4Q8TBB5 520 aa7□□□□□ -1.29
CDH13-211ENST00000568770 USP26Q9BXU7 913 aa7□□□□□ -1.29
CDH13-211ENST00000568770 CEP44Q9C0F1 390 aa7□□□□□ -1.29
CDH13-211ENST00000568770 PRKRIP1Q9H875 184 aaPredicted RBP7□□□□□ -1.29
CDH13-211ENST00000568770 GJD2Q9UKL4 321 aa7□□□□□ -1.29
CDH13-211ENST00000568770 OGDHLQ9ULD0 1010 aa7□□□□□ -1.29
CDH13-211ENST00000568770 LRRFIP2Q9Y608 721 aaKnown RBP7□□□□□ -1.29
CDH13-211ENST00000568770 KIF16BQ96L93 1317 aa7□□□□□ -1.29
CDH13-211ENST00000568770 BDP1A6H8Y1 2624 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 DDTLA6NHG4 134 aaPredicted RBP6.99□□□□□ -1.29
CDH13-211ENST00000568770 CTNND1O60716 968 aaKnown RBP6.99□□□□□ -1.29
CDH13-211ENST00000568770 ITGB2P05107 769 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 FGFR2P21802 821 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 NME2P22392 152 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 ARNTP27540 789 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 CHRNA4P43681 627 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 PPP2R3AQ06190 1150 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 EXOSC9Q06265 439 aaKnown RBP6.99□□□□□ -1.29
CDH13-211ENST00000568770 POU4F3Q15319 338 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 FAM109BQ6ICB4 259 aaPredicted RBP6.99□□□□□ -1.29
CDH13-211ENST00000568770 ANKRD44Q8N8A2 993 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 TRIB2Q92519 343 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 WDR89Q96FK6 387 aaPredicted RBP6.99□□□□□ -1.29
CDH13-211ENST00000568770 TLR6Q9Y2C9 796 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 SIPA1L1O43166 1804 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 FOCADQ5VW36 1801 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 UTYO14607 1347 aa6.99□□□□□ -1.29
CDH13-211ENST00000568770 RFX7Q2KHR2 1363 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 E9PSI1 815 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 ENTPD3O75355 529 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 COL6A1P12109 1028 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 SLC5A1P13866 664 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 GCLCP48506 637 aaPredicted RBP6.98□□□□□ -1.29
CDH13-211ENST00000568770 ZNF252P-AS1Q0IIN9 211 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 SPP2Q13103 211 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 DUOXA2Q1HG44 320 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 LRRC26Q2I0M4 334 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 MAP3K21Q5TCX8 1036 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 PCNX4Q63HM2 1172 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 CD163Q86VB7 1156 aa6.98□□□□□ -1.29
CDH13-211ENST00000568770 METTL16Q86W50 562 aaKnown RBP6.98□□□□□ -1.29
CDH13-211ENST00000568770 LENG1Q96BZ8 264 aaPredicted RBP6.98□□□□□ -1.29
CDH13-211ENST00000568770 NOC4LQ9BVI4 516 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms