RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 GUCY2DQ02846 1103 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 RAPGEF1Q13905 1077 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 SFMBT2Q5VUG0 894 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 FAM133AQ8N9E0 248 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 TSG101Q99816 390 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 EPB41L5Q9HCM4 733 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 EP400Q96L91 3159 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 F8W031 263 aaPredicted RBP20.21■□□□□ 0.83
PKD1-235ENST00000568591 ACTN1P12814 892 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 FKBP3Q00688 224 aaKnown RBP20.21■□□□□ 0.83
PKD1-235ENST00000568591 ADGRF4Q8IZF3 695 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 IQCDQ96DY2 449 aa20.21■□□□□ 0.83
PKD1-235ENST00000568591 ABCB11O95342 1321 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 SSU72P8A0A1W2PR75 194 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 POTEB3A0JP26 581 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 POTECB2RU33 542 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 HEXIM1O94992 359 aaKnown RBP20.2■□□□□ 0.82
PKD1-235ENST00000568591 FGFR1OPO95684 399 aaKnown RBP20.2■□□□□ 0.82
PKD1-235ENST00000568591 PDCLQ13371 301 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 PDIA5Q14554 519 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 SLC9C1Q4G0N8 1177 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 POTEBQ6S5H4 581 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 BCAS4Q8TDM0 211 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 CEP72Q9P209 647 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 CCNL1Q9UK58 526 aaPredicted RBP20.2■□□□□ 0.82
PKD1-235ENST00000568591 KIAA1024Q9UPX6 916 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 SAMM50Q9Y512 469 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 COL24A1Q17RW2 1714 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 FAM170AA1A519 330 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 STAT3P40763 770 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 NOVP48745 357 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 PPFIA1Q13136 1202 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 KCTD1Q719H9 257 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 CCDC43Q96MW1 224 aaKnown RBP20.2■□□□□ 0.82
PKD1-235ENST00000568591 KRT12Q99456 494 aa20.2■□□□□ 0.82
PKD1-235ENST00000568591 RBAK-RBAKDNI3L0D1 243 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 NT5C2P49902 561 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 CFAP221Q4G0U5 840 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 ZHX3Q9H4I2 956 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 BCAS3Q9H6U6 928 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 RIC8AQ9NPQ8 531 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 DDX4Q9NQI0 724 aaKnown RBP20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L15C9J2P7 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L10C9JJH3 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L13C9JLJ4 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L11C9JVI0 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L18D6R9N7 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L22D6RA61 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L17D6RBQ6 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L19D6RCP7 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L20D6RJB6 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 MARCH6O60337 910 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 CASP5P51878 434 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L24Q0WX57 530 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 KIAA0753Q2KHM9 967 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 EMBQ6PCB8 327 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 USP17L6PQ6QN14 398 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 SCFD1Q8WVM8 642 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 RAB34Q9BZG1 259 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 ATP6V0A2Q9Y487 856 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 PCDHA2Q9Y5H9 948 aa20.19■□□□□ 0.82
PKD1-235ENST00000568591 ZNF233A6NK53 670 aa20.18■□□□□ 0.82
PKD1-235ENST00000568591 EIF3HO15372 352 aaKnown RBP eCLIP20.18■□□□□ 0.824e-7■■■□□ 17.8
PKD1-235ENST00000568591 SERPING1P05155 500 aa20.18■□□□□ 0.82
PKD1-235ENST00000568591 SMARCA1P28370 1054 aa20.18■□□□□ 0.82
PKD1-235ENST00000568591 NOP2P46087 812 aaKnown RBP20.18■□□□□ 0.82
PKD1-235ENST00000568591 ORC2Q13416 577 aaPredicted RBP20.18■□□□□ 0.82
PKD1-235ENST00000568591 NAB2Q15742 525 aa20.18■□□□□ 0.82
PKD1-235ENST00000568591 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
PKD1-235ENST00000568591 HERC4Q5GLZ8 1057 aaPredicted RBP20.18■□□□□ 0.82
PKD1-235ENST00000568591 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
PKD1-235ENST00000568591 CASKIN2Q8WXE0 1202 aa20.18■□□□□ 0.82
PKD1-235ENST00000568591 CAVIN3Q969G5 261 aa20.18■□□□□ 0.82
PKD1-235ENST00000568591 PCDHA12Q9UN75 941 aa20.18■□□□□ 0.82
PKD1-235ENST00000568591 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.18■□□□□ 0.821e-5■■□□□ 14.3
PKD1-235ENST00000568591 GRID2IPA4D2P6 1211 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 GOLGA8KD6RF30 607 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 HSF2BPO75031 334 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 TRIM59Q8IWR1 403 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 DHX37Q8IY37 1157 aaKnown RBP20.17■□□□□ 0.82
PKD1-235ENST00000568591 PIK3R5Q8WYR1 880 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 GDF3Q9NR23 364 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 POLLQ9UGP5 575 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 DAGLAQ9Y4D2 1042 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 RAD21O60216 631 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 CLK2P49760 499 aaKnown RBP20.17■□□□□ 0.82
PKD1-235ENST00000568591 PSMD2Q13200 908 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 SLC18A3Q16572 532 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
PKD1-235ENST00000568591 GPBP1Q86WP2 473 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 KLHL7Q8IXQ5 586 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 PROM2Q8N271 834 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 RNF10Q8N5U6 811 aaKnown RBP20.17■□□□□ 0.82
PKD1-235ENST00000568591 RUFY1Q96T51 708 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 MXD3Q9BW11 206 aa20.17■□□□□ 0.82
PKD1-235ENST00000568591 SNHG28P0DPA3 235 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 RFC4P35249 363 aa20.16■□□□□ 0.82
PKD1-235ENST00000568591 INPP4AQ96PE3 977 aaPredicted RBP20.16■□□□□ 0.82
PKD1-235ENST00000568591 KCTD10Q9H3F6 313 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms