RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 MMP1P03956 469 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 KCNA2P16389 499 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 NR5A1Q13285 461 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 SNX17Q15036 470 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 INF2Q27J81 1249 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 PRR16Q569H4 304 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 METTL7BQ6UX53 244 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 PIK3AP1Q6ZUJ8 805 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 GIMAP8Q8ND71 665 aaPredicted RBP14.47□□□□□ -0.09
GINS3-209ENST00000567909 PPP1R13LQ8WUF5 828 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 KAT6AQ92794 2004 aa14.47□□□□□ -0.09
GINS3-209ENST00000567909 ARVCFO00192 962 aa14.46□□□□□ -0.09
GINS3-209ENST00000567909 ZNF286BP0CG31 522 aa14.46□□□□□ -0.09
GINS3-209ENST00000567909 USP11P51784 963 aa14.46□□□□□ -0.09
GINS3-209ENST00000567909 TLE2Q04725 743 aa14.46□□□□□ -0.09
GINS3-209ENST00000567909 ITGA7Q13683 1181 aa14.46□□□□□ -0.09
GINS3-209ENST00000567909 SAFBQ15424 915 aaKnown RBP eCLIP14.46□□□□□ -0.09
GINS3-209ENST00000567909 NIPA1Q7RTP0 329 aa14.46□□□□□ -0.09
GINS3-209ENST00000567909 DIS3L2Q8IYB7 885 aaKnown RBP14.46□□□□□ -0.09
GINS3-209ENST00000567909 SDF4Q9BRK5 362 aa14.46□□□□□ -0.09
GINS3-209ENST00000567909 AGO4Q9HCK5 861 aaKnown RBP14.46□□□□□ -0.09
GINS3-209ENST00000567909 ZMYND8Q9ULU4 1186 aaPredicted RBP14.46□□□□□ -0.09
GINS3-209ENST00000567909 TELO2Q9Y4R8 837 aa14.46□□□□□ -0.09
GINS3-209ENST00000567909 TRIP12Q14669 1992 aaPredicted RBP14.45□□□□□ -0.1
GINS3-209ENST00000567909 GRIN2DO15399 1336 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 IGLV3-22A0A075B6J6 115 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 FAM205CA6NFA0 338 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 BTBD18B2RXH4 712 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 H0YGN5 161 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 DDX39AO00148 427 aaKnown RBP14.45□□□□□ -0.1
GINS3-209ENST00000567909 EDIL3O43854 480 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 SYN1P17600 705 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 GJB2P29033 226 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 CIITAP33076 1130 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 SETQ01105 290 aaPredicted RBP14.45□□□□□ -0.1
GINS3-209ENST00000567909 ITGB3BPQ13352 177 aaPredicted RBP14.45□□□□□ -0.1
GINS3-209ENST00000567909 LETM2Q2VYF4 491 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 FAM47CQ5HY64 1035 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 EARS2Q5JPH6 523 aaKnown RBP14.45□□□□□ -0.1
GINS3-209ENST00000567909 C1orf53Q5VUE5 145 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 GPR20Q99678 358 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 ZNF577Q9BSK1 485 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 PRDM5Q9NQX1 630 aaPredicted RBP14.45□□□□□ -0.1
GINS3-209ENST00000567909 PCDH10Q9P2E7 1040 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 SMC3Q9UQE7 1217 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 KIF3AQ9Y496 699 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.45□□□□□ -0.1
GINS3-209ENST00000567909 MYH9P35579 1960 aaKnown RBP14.45□□□□□ -0.1
GINS3-209ENST00000567909 WDR81Q562E7 1941 aa14.45□□□□□ -0.1
GINS3-209ENST00000567909 DCDC2CA8MYV0 355 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 IPO5O00410 1097 aaKnown RBP14.44□□□□□ -0.1
GINS3-209ENST00000567909 PPFIA4O75335 1185 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 TDP2O95551 362 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 CDK7P50613 346 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 GNL2Q13823 731 aaKnown RBP14.44□□□□□ -0.1
GINS3-209ENST00000567909 NBPF20Q3BBV1 942 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 UTP14CQ5TAP6 766 aaKnown RBP14.44□□□□□ -0.1
GINS3-209ENST00000567909 NEK8Q86SG6 692 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 FBXO18Q8NFZ0 1043 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 KAT2BQ92831 832 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 TNFRSF25Q93038 417 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 JPH1Q9HDC5 661 aaPredicted RBP14.44□□□□□ -0.1
GINS3-209ENST00000567909 SLC9A2Q9UBY0 812 aa14.44□□□□□ -0.1
GINS3-209ENST00000567909 NFASCO94856 1347 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 MROH7Q68CQ1 1323 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 LGALS2P05162 132 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 HOXD8P13378 290 aaPredicted RBP14.43□□□□□ -0.1
GINS3-209ENST00000567909 PSEN2P49810 448 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 MFSD10Q14728 455 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 ANKRD33Q7Z3H0 272 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 SEPT1Q8WYJ6 367 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 LENG9Q96B70 501 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 PRKAG2Q9UGJ0 569 aa14.43□□□□□ -0.1
GINS3-209ENST00000567909 DDX25Q9UHL0 483 aaKnown RBP14.43□□□□□ -0.1
GINS3-209ENST00000567909 CYP3A7-CYP3A51PA0A087WV96 503 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 GSTTP1A0A1W2PQM5 241 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 K7ELQ4 463 aaPredicted RBP14.42□□□□□ -0.1
GINS3-209ENST00000567909 TLR3O15455 904 aaKnown RBP14.42□□□□□ -0.1
GINS3-209ENST00000567909 MSH4O15457 936 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 CCNT1O60563 726 aaKnown RBP14.42□□□□□ -0.1
GINS3-209ENST00000567909 F2P00734 622 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 CLTBP09497 229 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 ATP2B1P20020 1258 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 CYP3A7P24462 503 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 TCF7P36402 384 aaPredicted RBP14.42□□□□□ -0.1
GINS3-209ENST00000567909 ACTR2P61160 394 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 CUL4AQ13619 759 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 KIAA0753Q2KHM9 967 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 SH3RF1Q7Z6J0 888 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 FAM126BQ8IXS8 530 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 SLC43A3Q8NBI5 491 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 GJA10Q969M2 543 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 TOX2Q96NM4 488 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 C16orf70Q9BSU1 422 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 KATNAL1Q9BW62 490 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 TRPV6Q9H1D0 765 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 PDLIM7Q9NR12 457 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
GINS3-209ENST00000567909 TMEM39AQ9NV64 488 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms