RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 CYFIP1Q7L576 1253 aa14.48□□□□□ -0.09
LPCAT4-206ENST00000566581 C7orf31Q8N865 590 aa14.48□□□□□ -0.09
LPCAT4-206ENST00000566581 HERVK_113Q902F9 699 aa14.48□□□□□ -0.09
LPCAT4-206ENST00000566581 ZNF274Q96GC6 653 aaPredicted RBP14.48□□□□□ -0.09
LPCAT4-206ENST00000566581 CTAGE1Q96RT6 745 aa14.48□□□□□ -0.09
LPCAT4-206ENST00000566581 MTMR10Q9NXD2 777 aa14.48□□□□□ -0.09
LPCAT4-206ENST00000566581 HDAC6Q9UBN7 1215 aa14.48□□□□□ -0.09
LPCAT4-206ENST00000566581 CDH23Q9H251 3354 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 H3BRB1 525 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 NOP56O00567 594 aaKnown RBP14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 PFKMP08237 780 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 ZNF286BP0CG31 522 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 ACRP10323 421 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 RFC2P35250 354 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 CHMP4BP1P59074 171 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 ANAPC15P60006 121 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 RBL2Q08999 1139 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 AP3B2Q13367 1082 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 MCTP2Q6DN12 878 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 CCDC155Q8N6L0 562 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 RETREG2Q8NC44 543 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 CAGE1Q8TC20 777 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 CCDC12Q8WUD4 166 aaPredicted RBP14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 PPP1R13LQ8WUF5 828 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 VWCEQ96DN2 955 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 GPR20Q99678 358 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 RNF26Q9BY78 433 aaPredicted RBP14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 ZMYND12Q9H0C1 365 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 TUT1Q9H6E5 874 aaKnown RBP14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 JADE2Q9NQC1 790 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 NOD1Q9Y239 953 aa14.47□□□□□ -0.09
LPCAT4-206ENST00000566581 SORBS3O60504 671 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 LGALS2P05162 132 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 IQCF3P0C7M6 154 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 KCNA2P16389 499 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 SREBF1P36956 1147 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 AKAP17AQ02040 695 aaKnown RBP14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 MTMR1Q13613 665 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 Q7L0L9 218 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 IL17RAQ96F46 866 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 SCLYQ96I15 445 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 MXRA8Q9BRK3 442 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 ALG1Q9BT22 464 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 ANO3Q9BYT9 981 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 MTIF3Q9H2K0 278 aaKnown RBP14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 CHD7Q9P2D1 2997 aa14.46□□□□□ -0.09
LPCAT4-206ENST00000566581 TMEM265A0A087WTH1 108 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 ATP9AO75110 1047 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 PARNO95453 639 aaKnown RBP14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 HOXC8P31273 242 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 PTK7Q13308 1070 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 AFAP1L1Q8TED9 768 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 PRUNE2Q8WUY3 3088 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 EVPLQ92817 2033 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 PHKBQ93100 1093 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 UPF3BQ9BZI7 483 aaKnown RBP14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 C6orf50Q9HD87 102 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
LPCAT4-206ENST00000566581 MEIS1O00470 390 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 GNA11P29992 359 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 CCT2P78371 535 aaKnown RBP14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 CEP55Q53EZ4 464 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 ZNF697Q5TEC3 545 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 NIPA1Q7RTP0 329 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 CRYGNQ8WXF5 182 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 SEPT1Q8WYJ6 367 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 DHX38Q92620 1227 aaKnown RBP14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 SEMA6BQ9H3T3 888 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 NCOA5Q9HCD5 579 aaKnown RBP14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 KCNH7Q9NS40 1196 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 PDRG1Q9NUG6 133 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 ZNF215Q9UL58 517 aaPredicted RBP14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 TRANK1O15050 2925 aa14.44□□□□□ -0.1
LPCAT4-206ENST00000566581 LOXHD1Q8IVV2 1947 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 CYP3A4P08684 503 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 CKBP12277 381 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 SELPP16109 830 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 ARHGAP4P98171 946 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 HIC1Q14526 733 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 OTOP2Q7RTS6 562 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 SERINC5Q86VE9 423 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 TRIM22Q8IYM9 498 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 FAM177A1Q8N128 213 aaPredicted RBP14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 CYP2W1Q8TAV3 490 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 BICD2Q8TD16 824 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 SLC26A6Q9BXS9 759 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 RNPEPQ9H4A4 650 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 TMEM260Q9NX78 707 aa14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 CXXC1Q9P0U4 656 aaPredicted RBP14.43□□□□□ -0.1
LPCAT4-206ENST00000566581 MICAL3Q7RTP6 2002 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 NFASCO94856 1347 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 EYSQ5T1H1 3165 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 GSTTP1A0A1W2PQM5 241 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 C17orf102A2RUQ5 167 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 CPLX1O14810 134 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 SMIM10L2AP0DMW4 78 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 SMIM10L2BP0DMW5 78 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 GNAT1P11488 350 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 ACTN1P12814 892 aa14.42□□□□□ -0.1
LPCAT4-206ENST00000566581 DNAJB2P25686 324 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms