RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RASEFQ8IZ41 740 aa21.09■□□□□ 0.97
USB1-213ENST00000566292 TCEANC2Q96MN5 208 aa21.09■□□□□ 0.97
USB1-213ENST00000566292 NEK1Q96PY6 1258 aa21.09■□□□□ 0.97
USB1-213ENST00000566292 TUT1Q9H6E5 874 aaKnown RBP21.09■□□□□ 0.97
USB1-213ENST00000566292 PSTPIP2Q9H939 334 aa21.09■□□□□ 0.97
USB1-213ENST00000566292 PRDM6Q9NQX0 595 aa21.09■□□□□ 0.97
USB1-213ENST00000566292 KAT6AQ92794 2004 aa21.09■□□□□ 0.97
USB1-213ENST00000566292 PARNO95453 639 aaKnown RBP21.08■□□□□ 0.97
USB1-213ENST00000566292 HOXC8P31273 242 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 EXOSC10Q01780 885 aaKnown RBP21.08■□□□□ 0.97
USB1-213ENST00000566292 MBTPS1Q14703 1052 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 UBE2SQ16763 222 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 ADCK5Q3MIX3 580 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 XRRA1Q6P2D8 792 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 APOA5Q6Q788 366 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 HERC6Q8IVU3 1022 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 PPM1EQ8WY54 764 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 GPR20Q99678 358 aa21.08■□□□□ 0.97
USB1-213ENST00000566292 MICAL3Q7RTP6 2002 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 NOP56O00567 594 aaKnown RBP21.07■□□□□ 0.96
USB1-213ENST00000566292 CDC45O75419 566 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 ARHGEF15O94989 841 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 SMIM10L2AP0DMW4 78 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 SMIM10L2BP0DMW5 78 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 IGFBP4P22692 258 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 WDR5P61964 334 aaKnown RBP21.07■□□□□ 0.96
USB1-213ENST00000566292 TSGA10IPQ3SY00 556 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 CNKSR3Q6P9H4 555 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 SERINC5Q86VE9 423 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 SENP7Q9BQF6 1050 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 USP26Q9BXU7 913 aa21.07■□□□□ 0.96
USB1-213ENST00000566292 CNTNAP5Q8WYK1 1306 aa21.06■□□□□ 0.96
USB1-213ENST00000566292 REV3LO60673 3130 aa21.06■□□□□ 0.96
USB1-213ENST00000566292 C17orf102A2RUQ5 167 aa21.06■□□□□ 0.96
USB1-213ENST00000566292 TRIM50Q86XT4 487 aa21.06■□□□□ 0.96
USB1-213ENST00000566292 RNPEPQ9H4A4 650 aa21.06■□□□□ 0.96
USB1-213ENST00000566292 BRPF3Q9ULD4 1205 aa21.06■□□□□ 0.96
USB1-213ENST00000566292 TREHO43280 583 aa21.05■□□□□ 0.96
USB1-213ENST00000566292 KCNJ6P48051 423 aa21.05■□□□□ 0.96
USB1-213ENST00000566292 DEFB103AP81534 67 aa21.05■□□□□ 0.96
USB1-213ENST00000566292 SYNE3Q6ZMZ3 975 aa21.05■□□□□ 0.96
USB1-213ENST00000566292 DHX32Q7L7V1 743 aaKnown RBP21.05■□□□□ 0.96
USB1-213ENST00000566292 HEATR3Q7Z4Q2 680 aa21.05■□□□□ 0.96
USB1-213ENST00000566292 TMCO2Q7Z6W1 182 aaPredicted RBP21.05■□□□□ 0.96
USB1-213ENST00000566292 NLRX1Q86UT6 975 aa21.05■□□□□ 0.96
USB1-213ENST00000566292 ATP6V0A1Q93050 837 aa21.05■□□□□ 0.96
USB1-213ENST00000566292 CERS4Q9HA82 394 aa21.05■□□□□ 0.96
USB1-213ENST00000566292 PRRC2BQ5JSZ5 2229 aaKnown RBP21.05■□□□□ 0.96
USB1-213ENST00000566292 COL4A4P53420 1690 aaPredicted RBP21.05■□□□□ 0.96
USB1-213ENST00000566292 EPOPA6NHQ4 379 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 ATP9AO75110 1047 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 KCNA2P16389 499 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 ITGB5P18084 799 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 SP4Q02446 784 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 TAP1Q03518 808 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 FUT2Q10981 343 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 CCDC85BQ15834 202 aaPredicted RBP21.04■□□□□ 0.96
USB1-213ENST00000566292 WWC2Q6AWC2 1192 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 GPRASP2Q96D09 838 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 RBM28Q9NW13 759 aaKnown RBP21.04■□□□□ 0.96
USB1-213ENST00000566292 UBIAD1Q9Y5Z9 338 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 TTC28Q96AY4 2481 aa21.04■□□□□ 0.96
USB1-213ENST00000566292 KIF28PB7ZC32 967 aa21.03■□□□□ 0.96
USB1-213ENST00000566292 RFXAPO00287 272 aa21.03■□□□□ 0.96
USB1-213ENST00000566292 THPOP40225 353 aa21.03■□□□□ 0.96
USB1-213ENST00000566292 UTP14CQ5TAP6 766 aaKnown RBP21.03■□□□□ 0.96
USB1-213ENST00000566292 TYW1BQ6NUM6 668 aa21.03■□□□□ 0.96
USB1-213ENST00000566292 SPRED2Q7Z698 418 aa21.03■□□□□ 0.96
USB1-213ENST00000566292 PCDHA6Q9UN73 950 aa21.03■□□□□ 0.96
USB1-213ENST00000566292 PCDHA8Q9Y5H6 950 aa21.03■□□□□ 0.96
USB1-213ENST00000566292 SIP14410 1827 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 ABHD14A-ACY1A0A1B0GW23 586 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 SPDYE3A6NKU9 549 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 RSPH10B2B2RC85 870 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 ZBTB43O43298 467 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 TLL1O43897 1013 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 LGR5O75473 907 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 RSPH10BP0C881 870 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 RTN1Q16799 776 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 FAM217BQ9NTX9 383 aaPredicted RBP21.02■□□□□ 0.96
USB1-213ENST00000566292 SETD4Q9NVD3 440 aa21.02■□□□□ 0.96
USB1-213ENST00000566292 LCHNA4D1U4 455 aa21.01■□□□□ 0.95
USB1-213ENST00000566292 ADAM17P78536 824 aa21.01■□□□□ 0.95
USB1-213ENST00000566292 KRT32Q14532 448 aa21.01■□□□□ 0.95
USB1-213ENST00000566292 GIMAP8Q8ND71 665 aaPredicted RBP21.01■□□□□ 0.95
USB1-213ENST00000566292 CDHR1Q96JP9 859 aa21.01■□□□□ 0.95
USB1-213ENST00000566292 OSBPL7Q9BZF2 842 aa21.01■□□□□ 0.95
USB1-213ENST00000566292 PKD2L1Q9P0L9 805 aa21.01■□□□□ 0.95
USB1-213ENST00000566292 ZNF215Q9UL58 517 aaPredicted RBP21.01■□□□□ 0.95
USB1-213ENST00000566292 EMSYQ7Z589 1322 aa21.01■□□□□ 0.95
USB1-213ENST00000566292 KLF18A0A0U1RQI7 1052 aa21■□□□□ 0.95
USB1-213ENST00000566292 GOLGA8AA7E2F4 631 aa21■□□□□ 0.95
USB1-213ENST00000566292 GOLGA8BA8MQT2 603 aa21■□□□□ 0.95
USB1-213ENST00000566292 CPA1P15085 419 aa21■□□□□ 0.95
USB1-213ENST00000566292 CDC27P30260 824 aa21■□□□□ 0.95
USB1-213ENST00000566292 TCF7P36402 384 aaPredicted RBP21■□□□□ 0.95
USB1-213ENST00000566292 NAPAP54920 295 aa21■□□□□ 0.95
USB1-213ENST00000566292 MKRN4PQ13434 485 aaPredicted RBP21■□□□□ 0.95
USB1-213ENST00000566292 MTMR1Q13613 665 aa21■□□□□ 0.95
USB1-213ENST00000566292 IKBKEQ14164 716 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms