RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 NRBP1Q9UHY1 535 aa11.04□□□□□ -0.64
SF3B3-207ENST00000566095 TUBE1Q9UJT0 475 aa11.04□□□□□ -0.64
SF3B3-207ENST00000566095 NFASCO94856 1347 aa11.04□□□□□ -0.64
SF3B3-207ENST00000566095 NKRFO15226 690 aaKnown RBP eCLIP11.03□□□□□ -0.64
SF3B3-207ENST00000566095 AOC2O75106 756 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 HSPA6P17066 643 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 DEKP35659 375 aaKnown RBP11.03□□□□□ -0.64
SF3B3-207ENST00000566095 STAT6P42226 847 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 LACTBP83111 547 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-207ENST00000566095 CNTN2Q02246 1040 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 SP3Q02447 781 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 PPP2R5CQ13362 524 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 TTLL4Q14679 1199 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 RRAGBQ5VZM2 374 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 ZNF746Q6NUN9 644 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-207ENST00000566095 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 MAMDC4Q6UXC1 1216 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 SMAP1Q8IYB5 467 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-207ENST00000566095 SPATA20Q8TB22 786 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 MORC4Q8TE76 937 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 SNX29Q8TEQ0 813 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 SCFD2Q8WU76 684 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 SYMPKQ92797 1274 aaKnown RBP11.03□□□□□ -0.64
SF3B3-207ENST00000566095 ABHD16BQ9H3Z7 469 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
SF3B3-207ENST00000566095 ANO10Q9NW15 660 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 KIAA1468Q9P260 1216 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 MRVI1Q9Y6F6 885 aa11.03□□□□□ -0.64
SF3B3-207ENST00000566095 PLXNB2O15031 1838 aa11.02□□□□□ -0.64
SF3B3-207ENST00000566095 A0A1B0GVL5 298 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 WDR64B1ANS9 1081 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 PGK2P07205 417 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 HOXC6P09630 235 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 SLFN14P0C7P3 912 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 XRCC5P13010 732 aaKnown RBP11.02□□□□□ -0.65
SF3B3-207ENST00000566095 ITGB5P18084 799 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 CCT6AP40227 531 aaKnown RBP11.02□□□□□ -0.65
SF3B3-207ENST00000566095 NDUFA8P51970 172 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 MRPS9P82933 396 aaKnown RBP11.02□□□□□ -0.65
SF3B3-207ENST00000566095 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 MORN1Q5T089 497 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 OLFML2BQ68BL8 750 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 NCAPH2Q6IBW4 605 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 KRBA2Q6ZNG9 492 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 ARMCX2Q7L311 632 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 MIER3Q7Z3K6 550 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 GAS2L3Q86XJ1 694 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 CNNM3Q8NE01 707 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 FAM200AQ8TCP9 573 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 HAS1Q92839 578 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 LENG9Q96B70 501 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 CCDC43Q96MW1 224 aaKnown RBP11.02□□□□□ -0.65
SF3B3-207ENST00000566095 CLIC6Q96NY7 704 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 TUFT1Q9NNX1 390 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 DISC1Q9NRI5 854 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-207ENST00000566095 SAMM50Q9Y512 469 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 SMCHD1A6NHR9 2005 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 THSD7BQ9C0I4 1608 aa11.02□□□□□ -0.65
SF3B3-207ENST00000566095 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 WNT7AO00755 349 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 POLR2DO15514 142 aaKnown RBP11.01□□□□□ -0.65
SF3B3-207ENST00000566095 TRPA1O75762 1119 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 PSMD10O75832 226 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 SMC2O95347 1197 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 PSMC4P43686 418 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 C1QTNF8P60827 252 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 EPHA7Q15375 998 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 STX1AQ16623 288 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 HS1BP3Q53T59 392 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 BRDTQ58F21 947 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-207ENST00000566095 MFSD14CQ5VZR4 134 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 MIS18BP1Q6P0N0 1132 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 IL31RAQ8NI17 732 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 ATP6V0A1Q93050 837 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 MAML3Q96JK9 1138 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 GSDMAQ96QA5 445 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 TINF2Q9BSI4 451 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 POLR3CQ9BUI4 534 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-207ENST00000566095 GOLPH3LQ9H4A5 285 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 JPH1Q9HDC5 661 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-207ENST00000566095 RNF186Q9NXI6 227 aa11.01□□□□□ -0.65
SF3B3-207ENST00000566095 NOP56O00567 594 aaKnown RBP11□□□□□ -0.65
SF3B3-207ENST00000566095 FKTNO75072 461 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 P4HBP07237 508 aaKnown RBP11□□□□□ -0.65
SF3B3-207ENST00000566095 PSAPP07602 524 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 ARP10275 920 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 XRCC6P12956 609 aaKnown RBP eCLIP11□□□□□ -0.65
SF3B3-207ENST00000566095 RPA1P27694 616 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 PPP1R2P41236 205 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 TYRO3Q06418 890 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 SEPT14Q6ZU15 432 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 OTOP1Q7RTM1 612 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 SH3RF1Q7Z6J0 888 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 DHX58Q96C10 678 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 MLXIPQ9HAP2 919 aa11□□□□□ -0.65
SF3B3-207ENST00000566095 RMND1Q9NWS8 449 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms