RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 TINF2Q9BSI4 451 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 ABHD16BQ9H3Z7 469 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 AGO4Q9HCK5 861 aaKnown RBP8.46□□□□□ -1.06
GINS3-205ENST00000564814 VAV3Q9UKW4 847 aa8.46□□□□□ -1.06
GINS3-205ENST00000564814 ATG7O95352 703 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 SNAI1O95863 264 aaPredicted RBP8.45□□□□□ -1.06
GINS3-205ENST00000564814 MBD3O95983 291 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 PGK2P07205 417 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 HOXD8P13378 290 aaPredicted RBP8.45□□□□□ -1.06
GINS3-205ENST00000564814 SFNP31947 248 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 ZNF76P36508 570 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 KRT76Q01546 638 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 PDE4DQ08499 809 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 NEDD9Q14511 834 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 IL17AQ16552 155 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 TMEM266Q2M3C6 531 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 ZNF746Q6NUN9 644 aaPredicted RBP8.45□□□□□ -1.06
GINS3-205ENST00000564814 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 DPP9Q86TI2 863 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 SMAP1Q8IYB5 467 aaPredicted RBP8.45□□□□□ -1.06
GINS3-205ENST00000564814 ENGASEQ8NFI3 743 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 CYP2W1Q8TAV3 490 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 SCFD2Q8WU76 684 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 TIGD1Q96MW7 591 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 TTC12Q9H892 705 aaPredicted RBP8.45□□□□□ -1.06
GINS3-205ENST00000564814 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.45□□□□□ -1.06
GINS3-205ENST00000564814 SRRDQ9UH36 339 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 USP25Q9UHP3 1055 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 PCDHA12Q9UN75 941 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 Q9Y3F1 56 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 COL6A3P12111 3177 aa8.45□□□□□ -1.06
GINS3-205ENST00000564814 LYPLA2O95372 231 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 ARP10275 920 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 NCLP19338 710 aaKnown RBP8.44□□□□□ -1.06
GINS3-205ENST00000564814 RPA1P27694 616 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 ME1P48163 572 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 ITGB3BPQ13352 177 aaPredicted RBP8.44□□□□□ -1.06
GINS3-205ENST00000564814 TTLL4Q14679 1199 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 NFKBIBQ15653 356 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 PKN2Q16513 984 aaKnown RBP8.44□□□□□ -1.06
GINS3-205ENST00000564814 KLHL40Q2TBA0 621 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 SKOR2Q2VWA4 1001 aaPredicted RBP8.44□□□□□ -1.06
GINS3-205ENST00000564814 MAP3K21Q5TCX8 1036 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 WDR78Q5VTH9 848 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 LRCH2Q5VUJ6 765 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 HAUS3Q68CZ6 603 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 IQSEC1Q6DN90 963 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 TAPT1Q6NXT6 567 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 FBXO46Q6PJ61 603 aaPredicted RBP8.44□□□□□ -1.06
GINS3-205ENST00000564814 SHC4Q6S5L8 630 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 METTL7BQ6UX53 244 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 MRPS27Q92552 414 aaKnown RBP8.44□□□□□ -1.06
GINS3-205ENST00000564814 CHAMP1Q96JM3 812 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 PURBQ96QR8 312 aaKnown RBP8.44□□□□□ -1.06
GINS3-205ENST00000564814 ZNF577Q9BSK1 485 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 POLR3CQ9BUI4 534 aaPredicted RBP8.44□□□□□ -1.06
GINS3-205ENST00000564814 TEKT3Q9BXF9 490 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 CUEDC2Q9H467 287 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 MAGEF1Q9HAY2 307 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 GDPD2Q9HCC8 539 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 KDM3AQ9Y4C1 1321 aa8.44□□□□□ -1.06
GINS3-205ENST00000564814 IGKV6D-21A0A0A0MT36 114 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 PRPF40AO75400 957 aaKnown RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 ZNF865P0CJ78 1059 aaPredicted RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 CYBAP13498 195 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 ATP2B1P20020 1258 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 UBA1P22314 1058 aaKnown RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 MARCKSP29966 332 aaPredicted RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 FLT3LGP49771 235 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 JAK3P52333 1124 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 UBXN2AP68543 259 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 CAP1Q01518 475 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 CEBPZQ03701 1054 aaKnown RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 GRIN1Q05586 938 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 FAM160A1Q05DH4 1040 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 SNW1Q13573 536 aaKnown RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 ACVR2BQ13705 512 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 EPHA7Q15375 998 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 DUSP28Q4G0W2 176 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 FMR1NBQ8N0W7 255 aaPredicted RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 HSD17B14Q9BPX1 270 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 MMTAG2Q9BU76 263 aaKnown RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 NT5C3AQ9H0P0 336 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 CSRNP2Q9H175 543 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 TUFT1Q9NNX1 390 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 DDX19AQ9NUU7 478 aaKnown RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 STK17AQ9UEE5 414 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 DDX41Q9UJV9 622 aaKnown RBP8.43□□□□□ -1.06
GINS3-205ENST00000564814 TRIM17Q9Y577 477 aa8.43□□□□□ -1.06
GINS3-205ENST00000564814 MYH9P35579 1960 aaKnown RBP8.42□□□□□ -1.06
GINS3-205ENST00000564814 VWA3AA6NCI4 1184 aa8.42□□□□□ -1.06
GINS3-205ENST00000564814 GOLGA6L4A6NEF3 574 aa8.42□□□□□ -1.06
GINS3-205ENST00000564814 WDR64B1ANS9 1081 aa8.42□□□□□ -1.06
GINS3-205ENST00000564814 DKC1O60832 514 aaKnown RBP eCLIP8.42□□□□□ -1.06
GINS3-205ENST00000564814 GAS7O60861 476 aa8.42□□□□□ -1.06
GINS3-205ENST00000564814 ATP9AO75110 1047 aa8.42□□□□□ -1.06
GINS3-205ENST00000564814 FARP2O94887 1054 aaPredicted RBP8.42□□□□□ -1.06
GINS3-205ENST00000564814 MYL1P05976 194 aa8.42□□□□□ -1.06
GINS3-205ENST00000564814 MYCLP12524 364 aaPredicted RBP8.42□□□□□ -1.06
GINS3-205ENST00000564814 XRCC6P12956 609 aaKnown RBP eCLIP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms