RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 C2orf54Q08AI8 447 aa24.73■■□□□ 1.55
SPSB3-206ENST00000564709 MSL1Q68DK7 614 aa24.73■■□□□ 1.55
SPSB3-206ENST00000564709 WDR93Q6P2C0 686 aa24.73■■□□□ 1.55
SPSB3-206ENST00000564709 PDXDC1Q6P996 788 aa24.73■■□□□ 1.55
SPSB3-206ENST00000564709 GBP3Q9H0R5 595 aa24.73■■□□□ 1.55
SPSB3-206ENST00000564709 TMX4Q9H1E5 349 aaPredicted RBP24.73■■□□□ 1.55
SPSB3-206ENST00000564709 ANO9A1A5B4 782 aa24.73■■□□□ 1.55
SPSB3-206ENST00000564709 USO1O60763 962 aaKnown RBP24.73■■□□□ 1.55
SPSB3-206ENST00000564709 GFPT1Q06210 699 aaPredicted RBP24.73■■□□□ 1.55
SPSB3-206ENST00000564709 CKAP4Q07065 602 aaKnown RBP24.73■■□□□ 1.55
SPSB3-206ENST00000564709 HERC4Q5GLZ8 1057 aaPredicted RBP24.73■■□□□ 1.55
SPSB3-206ENST00000564709 ANKRD13CQ8N6S4 541 aa24.73■■□□□ 1.55
SPSB3-206ENST00000564709 LRRIQ3A6PVS8 624 aaPredicted RBP24.72■■□□□ 1.55
SPSB3-206ENST00000564709 MEIS2O14770 477 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 MMP10P09238 476 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 CYP11B2P19099 503 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 ICA1Q05084 483 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 PRR16Q569H4 304 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 SIAH1Q8IUQ4 282 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 CCDC65Q8IXS2 484 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 DCAF4Q8WV16 495 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 CRACR2AQ9BSW2 395 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 TRIM34Q9BYJ4 488 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 PCDHA2Q9Y5H9 948 aa24.72■■□□□ 1.55
SPSB3-206ENST00000564709 KRT18P05783 430 aaKnown RBP24.72■■□□□ 1.55
SPSB3-206ENST00000564709 MEIS1O00470 390 aa24.71■■□□□ 1.55
SPSB3-206ENST00000564709 HSPA1LP34931 641 aa24.71■■□□□ 1.55
SPSB3-206ENST00000564709 IKQ13123 557 aaPredicted RBP24.71■■□□□ 1.55
SPSB3-206ENST00000564709 TDRD12Q587J7 1177 aaKnown RBP24.71■■□□□ 1.55
SPSB3-206ENST00000564709 NLGN1Q8N2Q7 840 aa24.71■■□□□ 1.55
SPSB3-206ENST00000564709 SCFD1Q8WVM8 642 aa24.71■■□□□ 1.55
SPSB3-206ENST00000564709 PSMB7Q99436 277 aa24.71■■□□□ 1.55
SPSB3-206ENST00000564709 LSM14BQ9BX40 385 aaKnown RBP24.71■■□□□ 1.55
SPSB3-206ENST00000564709 VPS18Q9P253 973 aa24.71■■□□□ 1.55
SPSB3-206ENST00000564709 TACC1O75410 805 aa24.7■■□□□ 1.55
SPSB3-206ENST00000564709 ARHGAP4P98171 946 aa24.7■■□□□ 1.55
SPSB3-206ENST00000564709 GSPT2Q8IYD1 628 aaKnown RBP24.7■■□□□ 1.55
SPSB3-206ENST00000564709 TRIM58Q8NG06 486 aa24.7■■□□□ 1.55
SPSB3-206ENST00000564709 MASTLQ96GX5 879 aa24.7■■□□□ 1.55
SPSB3-206ENST00000564709 NAP1L4Q99733 375 aaKnown RBP24.7■■□□□ 1.55
SPSB3-206ENST00000564709 HINFPQ9BQA5 517 aa24.7■■□□□ 1.55
SPSB3-206ENST00000564709 NYAP2Q9P242 653 aa24.7■■□□□ 1.55
SPSB3-206ENST00000564709 PI4KBQ9UBF8 816 aa24.7■■□□□ 1.55
SPSB3-206ENST00000564709 SALL4Q9UJQ4 1053 aa24.7■■□□□ 1.55
SPSB3-206ENST00000564709 EIF3JO75822 258 aaKnown RBP24.7■■□□□ 1.54
SPSB3-206ENST00000564709 PDE6BP35913 854 aa24.7■■□□□ 1.54
SPSB3-206ENST00000564709 USP11P51784 963 aa24.7■■□□□ 1.54
SPSB3-206ENST00000564709 ARSHQ5FYA8 562 aa24.7■■□□□ 1.54
SPSB3-206ENST00000564709 MKL1Q969V6 931 aa24.7■■□□□ 1.54
SPSB3-206ENST00000564709 NOL4O94818 638 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 LCA5LO95447 670 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 PSMC6P62333 389 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 GPS2Q13227 327 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 PODNQ7Z5L7 613 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 COG1Q8WTW3 980 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 GDAP1L1Q96MZ0 367 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 DHX36Q9H2U1 1008 aaKnown RBP24.69■■□□□ 1.54
SPSB3-206ENST00000564709 SNX12Q9UMY4 172 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 F5H6K3 240 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 MAGEA1P43355 309 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 TNNT3P45378 269 aaPredicted RBP24.69■■□□□ 1.54
SPSB3-206ENST00000564709 KLRC3Q07444 240 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 HGSNATQ68CP4 663 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 ADAM21Q9UKJ8 722 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 JRKLQ9Y4A0 524 aa24.69■■□□□ 1.54
SPSB3-206ENST00000564709 TUBBP07437 444 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 CXCR5P32302 372 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 CASP5P51878 434 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 SLC12A3P55017 1021 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 POLR2FP61218 127 aaKnown RBP24.68■■□□□ 1.54
SPSB3-206ENST00000564709 RASSF7Q02833 373 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 NFRKBQ6P4R8 1299 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 CCDC102AQ96A19 550 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 GLT8D2Q9H1C3 349 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 KCTD10Q9H3F6 313 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 EMILIN3Q9NT22 766 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 SMARCAL1Q9NZC9 954 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 CYP3A7-CYP3A51PA0A087WV96 503 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 NCK2O43639 380 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 ECE2O60344 883 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 CYP3A7P24462 503 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 JAG1P78504 1218 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 PABPC4Q13310 644 aaKnown RBP eCLIP24.68■■□□□ 1.545e-6■□□□□ 10.8
SPSB3-206ENST00000564709 DACT2Q5SW24 774 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 CATSPER3Q86XQ3 398 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 ETNPPLQ8TBG4 499 aa24.68■■□□□ 1.54
SPSB3-206ENST00000564709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.68■■□□□ 1.54
SPSB3-206ENST00000564709 BUB1O43683 1085 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 TLR2O60603 784 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 PHACTR2O75167 634 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 NDUFB10O96000 172 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 SPIRE1Q08AE8 756 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 ASTE1Q2TB18 679 aaPredicted RBP24.67■■□□□ 1.54
SPSB3-206ENST00000564709 FAM83BQ5T0W9 1011 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 FOXR2Q6PJQ5 311 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 CREG2Q8IUH2 290 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 SLFN12Q8IYM2 578 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 RPGRIP1Q96KN7 1286 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 MBOAT7Q96N66 472 aa24.67■■□□□ 1.54
SPSB3-206ENST00000564709 EHD2Q9NZN4 543 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms