RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 RBAK-RBAKDNI3L0D1 243 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 TRAF5O00463 557 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 EBAG9O00559 213 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 IRF6O14896 467 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 ZBTB5O15062 677 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 SLC16A3O15427 465 aaKnown RBP8.41□□□□□ -1.06
ATXN3-249ENST00000564606 NMT2O60551 498 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 RNF40O75150 1001 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 SASH3O75995 380 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 UFL1O94874 794 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 SNHG28P0DPA3 235 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 GAP43P17677 238 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 RFX1P22670 979 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 CASP1P29466 404 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 HERVK_113P62684 666 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 EN1Q05925 392 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-249ENST00000564606 CETN1Q12798 172 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 TMEM119Q4V9L6 283 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 GPR153Q6NV75 609 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 PDXDC1Q6P996 788 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 RRAGAQ7L523 313 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 ARMC9Q7Z3E5 817 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 FRMD5Q7Z6J6 570 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 MAPKAPK5Q8IW41 473 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 EFCAB13Q8IY85 973 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 STAG2Q8N3U4 1231 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 LRRN4CLQ8ND94 238 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 CCDC26Q8TAB7 109 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 CAVIN3Q969G5 261 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 FAM20AQ96MK3 541 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 MRIQ9BWK5 157 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 RTFDC1Q9BY42 306 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-249ENST00000564606 EHD4Q9H223 541 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 TMEM60Q9H2L4 133 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 PLCB1Q9NQ66 1216 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 PANK4Q9NVE7 773 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 MTMR4Q9NYA4 1195 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 STIM2Q9P246 746 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 SERPINB13Q9UIV8 391 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 FBXL5Q9UKA1 691 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 DNM3Q9UQ16 869 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 MAPK8IP1Q9UQF2 711 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 ROBO1Q9Y6N7 1651 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 UBE4BO95155 1302 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 MACROD2A1Z1Q3 448 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 USP17L3A6NCW0 530 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 USP17L4A6NCW7 530 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 TRIM49BA6NDI0 452 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 TULP2O00295 520 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 KIAA0754O94854 1291 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 ATP1A1P05023 1023 aaKnown RBP8.4□□□□□ -1.06
ATXN3-249ENST00000564606 NUDT7P0C024 238 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 CYP2D6P10635 497 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 ALDH1B1P30837 517 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 ZNF543Q08ER8 600 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 KLHL30Q0D2K2 578 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 STK4Q13043 487 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 CUL1Q13616 776 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 ASIC2Q16515 512 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 MFSD14BQ5SR56 506 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 TYW1BQ6NUM6 668 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 WDR59Q6PJI9 974 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 RUFY4Q6ZNE9 571 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 USP17L1Q7RTZ2 530 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 MAATS1Q7Z4T9 603 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 C3orf20Q8ND61 904 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 ZNF384Q8TF68 577 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 SHISA4Q96DD7 197 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 RUNDC3BQ96NL0 473 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 SPAG5Q96R06 1193 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 PIGSQ96S52 555 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 OSBPL9Q96SU4 736 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 PNKPQ96T60 521 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-249ENST00000564606 FAM204AQ9H8W3 233 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 PSTPIP2Q9H939 334 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 SLC39A2Q9NP94 309 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 KCND2Q9NZV8 630 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 SEL1LQ9UBV2 794 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 HPCAL4Q9UM19 191 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 SIK3Q9Y2K2 1263 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 ATP6V0A2Q9Y487 856 aa8.4□□□□□ -1.06
ATXN3-249ENST00000564606 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.07
ATXN3-249ENST00000564606 NRAPQ86VF7 1730 aa8.4□□□□□ -1.07
ATXN3-249ENST00000564606 ATXN2Q99700 1313 aaKnown RBP8.39□□□□□ -1.07
ATXN3-249ENST00000564606 IRS2Q9Y4H2 1338 aa8.39□□□□□ -1.07
ATXN3-249ENST00000564606 A0A0A6YYK5 440 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-249ENST00000564606 GTPBP10A4D1E9 387 aaKnown RBP8.39□□□□□ -1.07
ATXN3-249ENST00000564606 HMGB1P1B2RPK0 211 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-249ENST00000564606 PDXKO00764 312 aa8.39□□□□□ -1.07
ATXN3-249ENST00000564606 CYTH3O43739 400 aa8.39□□□□□ -1.07
ATXN3-249ENST00000564606 TBCAO75347 108 aaKnown RBP8.39□□□□□ -1.07
ATXN3-249ENST00000564606 PDHBP11177 359 aa8.39□□□□□ -1.07
ATXN3-249ENST00000564606 TM4SF1P30408 202 aa8.39□□□□□ -1.07
ATXN3-249ENST00000564606 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-249ENST00000564606 EIF4A3P38919 411 aaKnown RBP8.39□□□□□ -1.07
ATXN3-249ENST00000564606 TNNI2P48788 182 aa8.39□□□□□ -1.07
ATXN3-249ENST00000564606 NPEPPSP55786 919 aa8.39□□□□□ -1.07
ATXN3-249ENST00000564606 FKBP1AP62942 108 aaKnown RBP8.39□□□□□ -1.07
ATXN3-249ENST00000564606 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms