RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 PFDN2Q9UHV9 154 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 WASF3Q9UPY6 502 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 HS3ST3A1Q9Y663 406 aa4.84□□□□□ -1.63
CHD9-211ENST00000564600 FAM221BA6H8Z2 402 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 PDPK1O15530 556 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 CYP2C8P10632 490 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 FGFR1P11362 822 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 GTF2F1P35269 517 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHD9-211ENST00000564600 THBS2P35442 1172 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 SLC6A11P48066 632 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 CR1LQ2VPA4 569 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 CRIP3Q6Q6R5 217 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 CD300LDQ6UXZ3 194 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 MIB1Q86YT6 1006 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 CKAP2LQ8IYA6 745 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHD9-211ENST00000564600 SEC14L1Q92503 715 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 C11orf84Q9BUA3 381 aaPredicted RBP4.83□□□□□ -1.64
CHD9-211ENST00000564600 ZNF747Q9BV97 191 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 AP5M1Q9H0R1 490 aa4.83□□□□□ -1.64
CHD9-211ENST00000564600 MROH6A6NGR9 719 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 MYO1BO43795 1136 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 TADA3O75528 432 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 ATP2B1P20020 1258 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 ACVRL1P37023 503 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 SERINC3Q13530 473 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 GLB1LQ6UWU2 654 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 NSMFQ6X4W1 530 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 ETV3LQ6ZN32 361 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 TTC9BQ8N6N2 239 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 LINC00482Q8N8I6 264 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 TXNDC5Q8NBS9 432 aaKnown RBP4.82□□□□□ -1.64
CHD9-211ENST00000564600 ZSWIM3Q96MP5 696 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 C8orf37Q96NL8 207 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 SPATA9Q9BWV2 254 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 VPS11Q9H270 941 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 GPR27Q9NS67 375 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 PPP4R1LQ9P1A2 415 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 RBPJLQ9UBG7 517 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 TRAF6Q9Y4K3 522 aa4.82□□□□□ -1.64
CHD9-211ENST00000564600 TCRBV5S2A0A599 114 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 H7BY64 318 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 B4GALT3O60512 393 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 COL6A2P12110 1019 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 GTF2A2P52657 109 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 ITGA1P56199 1179 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 EMC4Q5J8M3 183 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 FAM209AQ5JX71 171 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 STEAP3Q658P3 488 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 FAM126BQ8IXS8 530 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 LGI4Q8N135 537 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 PIP4K2CQ8TBX8 421 aa4.81□□□□□ -1.64
CHD9-211ENST00000564600 KISS1RQ969F8 398 aaPredicted RBP4.81□□□□□ -1.64
CHD9-211ENST00000564600 COA3Q9Y2R0 106 aaPredicted RBP4.81□□□□□ -1.64
CHD9-211ENST00000564600 TRAV20A0A0B4J274 112 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 HGSO14964 777 aaPredicted RBP4.8□□□□□ -1.64
CHD9-211ENST00000564600 GPR42O15529 346 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 LTFP02788 710 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 FAM153BP0C7A2 387 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 TGM1P22735 817 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 RPL13P26373 211 aaKnown RBP4.8□□□□□ -1.64
CHD9-211ENST00000564600 RBL2Q08999 1139 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 ADAM9Q13443 819 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 RASGRF1Q13972 1273 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 RASA3Q14644 834 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 LBX2Q6XYB7 198 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 CLEC4DQ8WXI8 215 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 KLC2Q9H0B6 622 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 CCDC113Q9H0I3 377 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 PPP1R1BQ9UD71 204 aaPredicted RBP4.8□□□□□ -1.64
CHD9-211ENST00000564600 ZNF652Q9Y2D9 606 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 TELO2Q9Y4R8 837 aa4.8□□□□□ -1.64
CHD9-211ENST00000564600 IQCA1LA6NCM1 817 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 SLC27A2O14975 620 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 NKRFO15226 690 aaKnown RBP eCLIP4.79□□□□□ -1.64
CHD9-211ENST00000564600 LRG1P02750 347 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 C6orf222P0C671 652 aaPredicted RBP4.79□□□□□ -1.64
CHD9-211ENST00000564600 SSRP1Q08945 709 aaKnown RBP4.79□□□□□ -1.64
CHD9-211ENST00000564600 MTERF2Q49AM1 385 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 SPDYAQ5MJ70 313 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 STYK1Q6J9G0 422 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 LRRC47Q8N1G4 583 aaKnown RBP4.79□□□□□ -1.64
CHD9-211ENST00000564600 KYQ8NBH2 561 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 IGDCC4Q8TDY8 1250 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 DCAF4Q8WV16 495 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 EXOC2Q96KP1 924 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 KCNJ15Q99712 375 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 PCED1AQ9H1Q7 454 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 EPB41L1Q9H4G0 881 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 SLITRK6Q9H5Y7 841 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 TSC22D4Q9Y3Q8 395 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 PCDHB4Q9Y5E5 795 aa4.79□□□□□ -1.64
CHD9-211ENST00000564600 TCRBV5S4A2TA0A5A2 114 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 U2SURPO15042 1029 aaKnown RBP4.78□□□□□ -1.64
CHD9-211ENST00000564600 LAMTOR5O43504 91 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 DGKIO75912 1065 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 GRK2P25098 689 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 GRK3P35626 688 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 GRIN1Q05586 938 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 KIAA2012Q0VF49 1180 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms