RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 CCDC155Q8N6L0 562 aa28.98■■■□□ 2.23
AC009041.3-201ENST00000564390 GPRASP2Q96D09 838 aa28.98■■■□□ 2.23
AC009041.3-201ENST00000564390 USP26Q9BXU7 913 aa28.98■■■□□ 2.23
AC009041.3-201ENST00000564390 AGXT2Q9BYV1 514 aa28.98■■■□□ 2.23
AC009041.3-201ENST00000564390 TMEM260Q9NX78 707 aa28.98■■■□□ 2.23
AC009041.3-201ENST00000564390 UBIAD1Q9Y5Z9 338 aa28.98■■■□□ 2.23
AC009041.3-201ENST00000564390 CCDC196A0A1B0GTZ2 297 aa28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 hCG_1984214I3L0E3 225 aa28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 ATP9AO75110 1047 aa28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 ERICH6BQ5W0A0 696 aa28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 ZNF713Q8N859 430 aaPredicted RBP28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 WNT8BQ93098 351 aa28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 PBX4Q9BYU1 374 aa28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 EHMT1Q9H9B1 1298 aa28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 GBF1Q92538 1859 aa28.97■■■□□ 2.23
AC009041.3-201ENST00000564390 SMCO2A6NFE2 343 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 H3BRB1 525 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 KCNA2P16389 499 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 MTMR1Q13613 665 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 PFKFB3Q16875 520 aaPredicted RBP28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 UTP14CQ5TAP6 766 aaKnown RBP28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 RUFY3Q7L099 469 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 FBXL16Q8N461 479 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 CAGE1Q8TC20 777 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 PHKBQ93100 1093 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 TIFAQ96CG3 184 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 CDX2Q99626 313 aaPredicted RBP28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 SENP7Q9BQF6 1050 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 ANO3Q9BYT9 981 aa28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 TUT1Q9H6E5 874 aaKnown RBP28.96■■■□□ 2.23
AC009041.3-201ENST00000564390 TRIP12Q14669 1992 aaPredicted RBP28.95■■■□□ 2.23
AC009041.3-201ENST00000564390 EPB41L2O43491 1005 aaKnown RBP28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 CENPBP07199 599 aaPredicted RBP28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 PFKMP08237 780 aa28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 SCG2P13521 617 aa28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 RFC2P35250 354 aa28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 AFAP1L1Q8TED9 768 aa28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 UPF3BQ9BZI7 483 aaKnown RBP28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 FTOQ9C0B1 505 aaKnown RBP eCLIP28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 NCOA5Q9HCD5 579 aaKnown RBP28.95■■■□□ 2.22
AC009041.3-201ENST00000564390 TOB2Q14106 344 aaPredicted RBP28.94■■■□□ 2.22
AC009041.3-201ENST00000564390 LRRC8DQ7L1W4 858 aa28.94■■■□□ 2.22
AC009041.3-201ENST00000564390 MYLIPQ8WY64 445 aa28.94■■■□□ 2.22
AC009041.3-201ENST00000564390 CDHR1Q96JP9 859 aa28.94■■■□□ 2.22
AC009041.3-201ENST00000564390 ZSWIM6Q9HCJ5 1215 aa28.94■■■□□ 2.22
AC009041.3-201ENST00000564390 TMEM265A0A087WTH1 108 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 SMIM10L2AP0DMW4 78 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 SMIM10L2BP0DMW5 78 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 CKBP12277 381 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 SELPP16109 830 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 CCT2P78371 535 aaKnown RBP28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 PTK7Q13308 1070 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 LARP6Q9BRS8 491 aaKnown RBP28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 JADE2Q9NQC1 790 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 CYP46A1Q9Y6A2 500 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 SLC4A7Q9Y6M7 1214 aa28.93■■■□□ 2.22
AC009041.3-201ENST00000564390 ADAMTS3O15072 1205 aa28.92■■■□□ 2.22
AC009041.3-201ENST00000564390 PDIA3P30101 505 aaKnown RBP28.92■■■□□ 2.22
AC009041.3-201ENST00000564390 PKN1Q16512 942 aa28.92■■■□□ 2.22
AC009041.3-201ENST00000564390 TRIM71Q2Q1W2 868 aaKnown RBP28.92■■■□□ 2.22
AC009041.3-201ENST00000564390 GIMAP8Q8ND71 665 aaPredicted RBP28.92■■■□□ 2.22
AC009041.3-201ENST00000564390 CYP2W1Q8TAV3 490 aa28.92■■■□□ 2.22
AC009041.3-201ENST00000564390 CDH23Q9H251 3354 aa28.92■■■□□ 2.22
AC009041.3-201ENST00000564390 C17orf102A2RUQ5 167 aa28.91■■■□□ 2.22
AC009041.3-201ENST00000564390 CLK2P49760 499 aaKnown RBP28.91■■■□□ 2.22
AC009041.3-201ENST00000564390 RABGGTBP53611 331 aa28.91■■■□□ 2.22
AC009041.3-201ENST00000564390 RBL2Q08999 1139 aa28.91■■■□□ 2.22
AC009041.3-201ENST00000564390 JAKMIP3Q5VZ66 844 aa28.91■■■□□ 2.22
AC009041.3-201ENST00000564390 SLC26A6Q9BXS9 759 aa28.91■■■□□ 2.22
AC009041.3-201ENST00000564390 PRPF3O43395 683 aaKnown RBP28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 FOSP01100 380 aaPredicted RBP28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 ACTN1P12814 892 aa28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 TCF7P36402 384 aaPredicted RBP28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 AP3B2Q13367 1082 aa28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 GPNMBQ14956 572 aa28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 GRIN2CQ14957 1233 aa28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 NTRK3Q16288 839 aa28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 ATP6V0A1Q93050 837 aa28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 MXRA8Q9BRK3 442 aa28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 ZNF576Q9H609 170 aa28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 ZNF215Q9UL58 517 aaPredicted RBP28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 YBX2Q9Y2T7 364 aaKnown RBP28.9■■■□□ 2.22
AC009041.3-201ENST00000564390 ATP2A2P16615 1042 aaKnown RBP28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 HOXC8P31273 242 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 SREBF1P36956 1147 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 EVCP57679 992 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 RAB30Q15771 203 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 ZNF618Q5T7W0 954 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 SERINC5Q86VE9 423 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 TET1Q8NFU7 2136 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 TM6SF1Q9BZW5 370 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 GLT8D2Q9H1C3 349 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 NKX2-4Q9H2Z4 354 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 RNPEPQ9H4A4 650 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 KCNH7Q9NS40 1196 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 MSRAQ9UJ68 235 aa28.89■■■□□ 2.22
AC009041.3-201ENST00000564390 TREHO43280 583 aa28.88■■■□□ 2.21
AC009041.3-201ENST00000564390 NBNO60934 754 aa28.88■■■□□ 2.21
AC009041.3-201ENST00000564390 AKAP17AQ02040 695 aaKnown RBP28.88■■■□□ 2.21
AC009041.3-201ENST00000564390 TRAF7Q6Q0C0 670 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms