RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 CASP1P29466 404 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 HERVK_113P62684 666 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 SPIRE1Q08AE8 756 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 DPYDQ12882 1025 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 LUZP1Q86V48 1076 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 IL31RAQ8NI17 732 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 SNX29Q8TEQ0 813 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 CUEDC2Q9H467 287 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 MAN1B1Q9UKM7 699 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 FRMPD4Q14CM0 1322 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 SMC2O95347 1197 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 ITGBL1O95965 494 aaPredicted RBP19.76■□□□□ 0.75
GDE1-203ENST00000564172 PABPC4Q13310 644 aaKnown RBP eCLIP19.76■□□□□ 0.75
GDE1-203ENST00000564172 GRB10Q13322 594 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 EP400NLQ6ZTU2 488 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 PURBQ96QR8 312 aaKnown RBP19.76■□□□□ 0.75
GDE1-203ENST00000564172 RMDN3Q96TC7 470 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 MXRA8Q9BRK3 442 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 MYO1CO00159 1063 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 PCNX4Q63HM2 1172 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 RIOX2Q8IUF8 465 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 CHST13Q8NET6 341 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 PNMA5Q96PV4 448 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 MAF1Q9H063 256 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 A1CFQ9NQ94 594 aaKnown RBP19.76■□□□□ 0.75
GDE1-203ENST00000564172 KBTBD4Q9NVX7 518 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 JRKLQ9Y4A0 524 aa19.76■□□□□ 0.75
GDE1-203ENST00000564172 GTPBP6O43824 516 aaPredicted RBP19.75■□□□□ 0.75
GDE1-203ENST00000564172 EIF2AK2P19525 551 aaKnown RBP19.75■□□□□ 0.75
GDE1-203ENST00000564172 BMP6P22004 513 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 IQCB1Q15051 598 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 CST9Q5W186 159 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 NAT10Q9H0A0 1025 aaKnown RBP19.75■□□□□ 0.75
GDE1-203ENST00000564172 BLZF1Q9H2G9 400 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 PXMP2Q9NR77 195 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 CYP39A1Q9NYL5 469 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.75■□□□□ 0.75
GDE1-203ENST00000564172 ITGB5P18084 799 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 OSBPP22059 807 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 GSCP56915 257 aaPredicted RBP19.75■□□□□ 0.75
GDE1-203ENST00000564172 MRPS9P82933 396 aaKnown RBP19.75■□□□□ 0.75
GDE1-203ENST00000564172 SETQ01105 290 aaPredicted RBP19.75■□□□□ 0.75
GDE1-203ENST00000564172 CUL4BQ13620 913 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 PGM5Q15124 567 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 CHADLQ6NUI6 762 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 TRIML1Q8N9V2 468 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 CDK5RAP3Q96JB5 506 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 MS4A4AQ96JQ5 239 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 PLCD4Q9BRC7 762 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 PDCD2LQ9BRP1 358 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 SPATC1LQ9H0A9 340 aa19.75■□□□□ 0.75
GDE1-203ENST00000564172 ARP10275 920 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 MORC3Q14149 939 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 ARHGEF16Q5VV41 709 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 C17orf53Q8N3J3 647 aaPredicted RBP19.74■□□□□ 0.75
GDE1-203ENST00000564172 SLC5A5Q92911 643 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 GSDMAQ96QA5 445 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 PAGR1Q9BTK6 254 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 MAGEF1Q9HAY2 307 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 CWC15Q9P013 229 aaKnown RBP19.74■□□□□ 0.75
GDE1-203ENST00000564172 VAV3Q9UKW4 847 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 CNMDO75829 334 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 ECM1Q16610 540 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 CCDC91Q7Z6B0 441 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 ZNF446Q9NWS9 450 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 UBIAD1Q9Y5Z9 338 aa19.74■□□□□ 0.75
GDE1-203ENST00000564172 PSMD10O75832 226 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 BCRP11274 1271 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 TMEM119Q4V9L6 283 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 HYIQ5T013 277 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 TEX35Q5T0J7 233 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 SWT1Q5T5J6 900 aaKnown RBP19.73■□□□□ 0.75
GDE1-203ENST00000564172 NIPA1Q7RTP0 329 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 BLOC1S4Q9NUP1 217 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 RBPJLQ9UBG7 517 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 STK17AQ9UEE5 414 aa19.73■□□□□ 0.75
GDE1-203ENST00000564172 A0A0G2JMZ2 1700 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 CETPP11597 493 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 CCT6AP40227 531 aaKnown RBP19.72■□□□□ 0.75
GDE1-203ENST00000564172 GTF2A2P52657 109 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 MAP2K1Q02750 393 aaPredicted RBP19.72■□□□□ 0.75
GDE1-203ENST00000564172 MKRN3Q13064 507 aaKnown RBP19.72■□□□□ 0.75
GDE1-203ENST00000564172 LRCH2Q5VUJ6 765 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 OTOP1Q7RTM1 612 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 BPIFA3Q9BQP9 254 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 ZNF577Q9BSK1 485 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 WDR11Q9BZH6 1224 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 TXNRD2Q9NNW7 524 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 KCNH7Q9NS40 1196 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 FBXO40Q9UH90 709 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 RBBP6Q7Z6E9 1792 aaKnown RBP19.72■□□□□ 0.75
GDE1-203ENST00000564172 MYL1P05976 194 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 MYCLP12524 364 aaPredicted RBP19.72■□□□□ 0.75
GDE1-203ENST00000564172 BMS1Q14692 1282 aaKnown RBP19.72■□□□□ 0.75
GDE1-203ENST00000564172 NCAPH2Q6IBW4 605 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 DHX40Q8IX18 779 aaKnown RBP19.72■□□□□ 0.75
GDE1-203ENST00000564172 MOV10L1Q9BXT6 1211 aaKnown RBP19.72■□□□□ 0.75
GDE1-203ENST00000564172 JADE2Q9NQC1 790 aa19.72■□□□□ 0.75
GDE1-203ENST00000564172 KDM3AQ9Y4C1 1321 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 IPO5O00410 1097 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms