RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 SMIM10L2AP0DMW4 78 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 SMIM10L2BP0DMW5 78 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 FGD1P98174 961 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 ZNF200P98182 395 aaPredicted RBP10.98□□□□□ -0.65
CLN6-203ENST00000563917 SP4Q02446 784 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 TAP1Q03518 808 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 UTP14CQ5TAP6 766 aaKnown RBP10.98□□□□□ -0.65
CLN6-203ENST00000563917 CREB3L3Q68CJ9 461 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 USP17L6PQ6QN14 398 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 RSPH3Q86UC2 560 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 SERINC5Q86VE9 423 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 SEPT8Q92599 483 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 SENP7Q9BQF6 1050 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 ESYT1Q9BSJ8 1104 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 C16orf70Q9BSU1 422 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 TAF6LQ9Y6J9 622 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 A0A0C4DFX4 3053 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 GJB5O95377 273 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 POU3F3P20264 500 aaPredicted RBP10.97□□□□□ -0.65
CLN6-203ENST00000563917 MRPS9P82933 396 aaKnown RBP10.97□□□□□ -0.65
CLN6-203ENST00000563917 SLC35G1Q2M3R5 365 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 FAM117BQ6P1L5 589 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 HEATR3Q7Z4Q2 680 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 MICU3Q86XE3 530 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 MYOCDQ8IZQ8 938 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 CCDC82Q8N4S0 544 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 SRBD1Q8N5C6 995 aaKnown RBP10.97□□□□□ -0.65
CLN6-203ENST00000563917 FANCBQ8NB91 859 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 ADAMTS19Q8TE59 1207 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 GPKOWQ92917 476 aaPredicted RBP eCLIP10.97□□□□□ -0.65
CLN6-203ENST00000563917 TNPO1Q92973 898 aaKnown RBP10.97□□□□□ -0.65
CLN6-203ENST00000563917 GPRASP2Q96D09 838 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 TGS1Q96RS0 853 aaKnown RBP10.97□□□□□ -0.65
CLN6-203ENST00000563917 CTAGE1Q96RT6 745 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 UHRF1Q96T88 793 aaPredicted RBP10.97□□□□□ -0.65
CLN6-203ENST00000563917 GPR20Q99678 358 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 LSG1Q9H089 658 aaKnown RBP10.97□□□□□ -0.65
CLN6-203ENST00000563917 RNPEPQ9H4A4 650 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 RBM28Q9NW13 759 aaKnown RBP10.97□□□□□ -0.65
CLN6-203ENST00000563917 COG5Q9UP83 839 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 INSL6Q9Y581 213 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 MTCH2Q9Y6C9 303 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 FRMPD4Q14CM0 1322 aa10.97□□□□□ -0.65
CLN6-203ENST00000563917 NRCAMQ92823 1304 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 RFXAPO00287 272 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 MEIS2O14770 477 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 MAFGO15525 162 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 TREHO43280 583 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 PLEKHA8P1O95397 391 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 CTSHP09668 335 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 RXRAP19793 462 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 DEFB103AP81534 67 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 ARHGAP4P98171 946 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 MTMR1Q13613 665 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 KRT32Q14532 448 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 TRIM71Q2Q1W2 868 aaKnown RBP10.96□□□□□ -0.65
CLN6-203ENST00000563917 CENPQQ7L2Z9 268 aaPredicted RBP10.96□□□□□ -0.65
CLN6-203ENST00000563917 DBF4BQ8NFT6 615 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 SEPT1Q8WYJ6 367 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 APBB2Q92870 758 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 GLG1Q92896 1179 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 SETD4Q9NVD3 440 aa10.96□□□□□ -0.65
CLN6-203ENST00000563917 RPLP2P05387 115 aaKnown RBP10.95□□□□□ -0.66
CLN6-203ENST00000563917 NAPAP54920 295 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 GRB10Q13322 594 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 GPNMBQ14956 572 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 NECTIN1Q15223 517 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 BMP2KLQ5H9B9 411 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 TAF2Q6P1X5 1199 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 TMTC3Q6ZXV5 915 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 TEX2Q8IWB9 1127 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 CMTR1Q8N1G2 835 aaKnown RBP10.95□□□□□ -0.66
CLN6-203ENST00000563917 HLA-CQ95604 372 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 YME1L1Q96TA2 773 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 LRRC2Q9BYS8 371 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 GLT8D2Q9H1C3 349 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 AZI2Q9H6S1 392 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 ERAP1Q9NZ08 941 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 LMCD1Q9NZU5 365 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 MTUS1Q9ULD2 1270 aa10.95□□□□□ -0.66
CLN6-203ENST00000563917 NAP1L2Q9ULW6 460 aaPredicted RBP10.95□□□□□ -0.66
CLN6-203ENST00000563917 TET1Q8NFU7 2136 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 hCG_1984214I3L0E3 225 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 ZBTB43O43298 467 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 FOSP01100 380 aaPredicted RBP10.94□□□□□ -0.66
CLN6-203ENST00000563917 HMGB1P09429 215 aaKnown RBP10.94□□□□□ -0.66
CLN6-203ENST00000563917 TCF7P36402 384 aaPredicted RBP10.94□□□□□ -0.66
CLN6-203ENST00000563917 ZNF76P36508 570 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 ERVK-21P61565 698 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 PPFIA1Q13136 1202 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 RTN1Q16799 776 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 PTPROQ16827 1216 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 PLEKHG4Q58EX7 1191 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 TMCO2Q7Z6W1 182 aaPredicted RBP10.94□□□□□ -0.66
CLN6-203ENST00000563917 SGMS1Q86VZ5 419 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 TRIM50Q86XT4 487 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 RAB11FIP4Q86YS3 637 aa10.94□□□□□ -0.66
CLN6-203ENST00000563917 ZNF713Q8N859 430 aaPredicted RBP10.94□□□□□ -0.66
CLN6-203ENST00000563917 WNT8BQ93098 351 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms