RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SERPING1P05155 500 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 FAM228BP0C875 321 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 LSP1P33241 339 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
ABCA3-203ENST00000563623 CDK17Q00537 523 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 MCTP2Q6DN12 878 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 SLC51AQ86UW1 340 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 ZSCAN29Q8IWY8 852 aaPredicted RBP12.99□□□□□ -0.33
ABCA3-203ENST00000563623 CCDC114Q96M63 670 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 LZTS2Q9BRK4 669 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 ZMYND12Q9H0C1 365 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 BLOC1S4Q9NUP1 217 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 ADAMTSL3P82987 1691 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
ABCA3-203ENST00000563623 RAD51CO43502 376 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 MYZAPP0CAP1 466 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 RASA1P20936 1047 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 LRRC63Q05C16 580 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 GRIK5Q16478 980 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 ZNF662Q6ZS27 426 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 RPAINQ86UA6 219 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 CEP95Q96GE4 821 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 KIAA1024Q9UPX6 916 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 TLDC2A0PJX2 215 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 PALM3A6NDB9 673 aaPredicted RBP12.98□□□□□ -0.33
ABCA3-203ENST00000563623 E9PMD0 336 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 ACTN1P12814 892 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
ABCA3-203ENST00000563623 BTDP43251 543 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 SATB1Q01826 763 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 COASYQ13057 564 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 ADAM9Q13443 819 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 CCDC121Q6ZUS5 278 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 GPBP1Q86WP2 473 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 RAD54LQ92698 747 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 STK17AQ9UEE5 414 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 SHOX2O60902 331 aaPredicted RBP12.98□□□□□ -0.33
ABCA3-203ENST00000563623 SLC16A2P36021 539 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 GSTO1P78417 241 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 BAP1Q92560 729 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 PNMA5Q96PV4 448 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 LRRC27Q9C0I9 530 aa12.98□□□□□ -0.33
ABCA3-203ENST00000563623 DDX47Q9H0S4 455 aaKnown RBP12.98□□□□□ -0.33
ABCA3-203ENST00000563623 DDX60Q8IY21 1712 aaKnown RBP12.97□□□□□ -0.33
ABCA3-203ENST00000563623 PVALEFA0A1B0GWK0 134 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 BIRC2Q13490 618 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 SF3B3Q15393 1217 aaKnown RBP12.97□□□□□ -0.33
ABCA3-203ENST00000563623 CCDC65Q8IXS2 484 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 WDR66Q8TBY9 1149 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 PCDHA12Q9UN75 941 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
ABCA3-203ENST00000563623 NUP98P52948 1817 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 DISP2A7MBM2 1401 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 PRLRP16471 622 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
ABCA3-203ENST00000563623 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 DAGLBQ8NCG7 672 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 CEP72Q9P209 647 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 GRIN2DO15399 1336 aa12.97□□□□□ -0.33
ABCA3-203ENST00000563623 KRIT1O00522 736 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 CETN3O15182 167 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 KCNMA1Q12791 1236 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 RNF10Q8N5U6 811 aaKnown RBP12.96□□□□□ -0.33
ABCA3-203ENST00000563623 JPH2Q9BR39 696 aaPredicted RBP12.96□□□□□ -0.33
ABCA3-203ENST00000563623 DDX25Q9UHL0 483 aaKnown RBP12.96□□□□□ -0.33
ABCA3-203ENST00000563623 UBR2Q8IWV8 1755 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 TIAM2Q8IVF5 1701 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 PPP1R37O75864 691 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 IKQ13123 557 aaPredicted RBP12.96□□□□□ -0.33
ABCA3-203ENST00000563623 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
ABCA3-203ENST00000563623 GLE1Q53GS7 698 aaKnown RBP12.96□□□□□ -0.33
ABCA3-203ENST00000563623 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 PEX26Q7Z412 305 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 GIMAP7Q8NHV1 300 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 ZNF473Q8WTR7 871 aaKnown RBP12.96□□□□□ -0.33
ABCA3-203ENST00000563623 ATP6V1G3Q96LB4 118 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 RIC8AQ9NPQ8 531 aa12.96□□□□□ -0.33
ABCA3-203ENST00000563623 M0R2N6 131 aa12.96□□□□□ -0.34
ABCA3-203ENST00000563623 TMOD1P28289 359 aa12.96□□□□□ -0.34
ABCA3-203ENST00000563623 KRT71Q3SY84 523 aa12.96□□□□□ -0.34
ABCA3-203ENST00000563623 NLRP14Q86W24 1093 aa12.96□□□□□ -0.34
ABCA3-203ENST00000563623 ARFGAP2Q8N6H7 521 aa12.96□□□□□ -0.34
ABCA3-203ENST00000563623 CCDC113Q9H0I3 377 aa12.96□□□□□ -0.34
ABCA3-203ENST00000563623 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.34
ABCA3-203ENST00000563623 MEFVO15553 781 aaPredicted RBP12.95□□□□□ -0.34
ABCA3-203ENST00000563623 CPLX4Q7Z7G2 160 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 CABS1Q96KC9 395 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 SH3GL2Q99962 352 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 SSU72P8A0A1W2PR75 194 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 MEIS1O00470 390 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 NR2F2P24468 414 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 UHMK1Q8TAS1 419 aaKnown RBP12.95□□□□□ -0.34
ABCA3-203ENST00000563623 U2AF1L4Q8WU68 220 aaKnown RBP12.95□□□□□ -0.34
ABCA3-203ENST00000563623 CAVIN3Q969G5 261 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 PLCD4Q9BRC7 762 aa12.95□□□□□ -0.34
ABCA3-203ENST00000563623 EPN3Q9H201 632 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms