RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 IGLV3-22A0A075B6J6 115 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 SPDYE3A6NKU9 549 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 M0R2N6 131 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 SORBS3O60504 671 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 PFKFB2O60825 505 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 FOSP01100 380 aaPredicted RBP16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 CYP2C9P11712 490 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 CSF2RAP15509 400 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 PSEN2P49810 448 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 AK2P54819 239 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 RBL2Q08999 1139 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 NEDD9Q14511 834 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 TMEM240Q5SV17 173 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 GPR153Q6NV75 609 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 CYFIP1Q7L576 1253 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 MXRA8Q9BRK3 442 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 SLC26A6Q9BXS9 759 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 PPP1R12CQ9BZL4 782 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 GLT8D2Q9H1C3 349 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 HIPK3Q9H422 1215 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 GTF2IRD1Q9UHL9 959 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 KAT6AQ92794 2004 aa16.95■□□□□ 0.3
RPUSD1-204ENST00000563560 MEIS1O00470 390 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 LARGE1O95461 756 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 LGALS2P05162 132 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 CYP3A4P08684 503 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 ST3GAL1Q11201 340 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 MFSD10Q14728 455 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 GPNMBQ14956 572 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 KIAA0753Q2KHM9 967 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 TRIM71Q2Q1W2 868 aaKnown RBP16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 TRAF7Q6Q0C0 670 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 SH3GLB2Q9NR46 395 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 HDAC6Q9UBN7 1215 aa16.94■□□□□ 0.3
RPUSD1-204ENST00000563560 GSTTP1A0A1W2PQM5 241 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 FAM86B1E9PN63 330 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 MAFGO15525 162 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 FAM86B2P0C5J1 330 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 ITGB3BPQ13352 177 aaPredicted RBP16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 NLRX1Q86UT6 975 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 WNT8BQ93098 351 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 LENG9Q96B70 501 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 AIFM3Q96NN9 605 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 MLXIPQ9HAP2 919 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 KCNH7Q9NS40 1196 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 VPS54Q9P1Q0 977 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 TRANK1O15050 2925 aa16.93■□□□□ 0.3
RPUSD1-204ENST00000563560 RBAK-RBAKDNI3L0D1 243 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 DHX15O43143 795 aaKnown RBP16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 SUPT20HL2P0C7V6 817 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 ARP10275 920 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 ADAM17P78536 824 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 ARHGAP4P98171 946 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 STK3Q13188 491 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 PPIGQ13427 754 aaKnown RBP eCLIP16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 MTMR1Q13613 665 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 CEP55Q53EZ4 464 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 JAKMIP3Q5VZ66 844 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 NIPA1Q7RTP0 329 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 RASGRP4Q8TDF6 673 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 PCYT2Q99447 389 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 KATNAL1Q9BW62 490 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 IL23AQ9NPF7 189 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 NFASCO94856 1347 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 STK36Q9NRP7 1315 aa16.92■□□□□ 0.3
RPUSD1-204ENST00000563560 H3BRB1 525 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 DEXIO95424 95 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 FDPSP14324 419 aaKnown RBP16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 ZNF200P98182 395 aaPredicted RBP16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 PTGISQ16647 500 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 ME3Q16798 604 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 TRIM50Q86XT4 487 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 TMEM199Q8N511 208 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 DAGLBQ8NCG7 672 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 SCLYQ96I15 445 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 ALG1Q9BT22 464 aa16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 TUT1Q9H6E5 874 aaKnown RBP16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 AGO4Q9HCK5 861 aaKnown RBP16.91■□□□□ 0.3
RPUSD1-204ENST00000563560 MYH9P35579 1960 aaKnown RBP16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 DTNBO60941 627 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 LGR5O75473 907 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 ATG7O95352 703 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 ACRP10323 421 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 CIITAP33076 1130 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 CCL23P55773 120 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 FAM47CQ5HY64 1035 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 FAM109BQ6ICB4 259 aaPredicted RBP16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 FAM177A1Q8N128 213 aaPredicted RBP16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 REXO1Q8N1G1 1221 aaKnown RBP16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 CCDC12Q8WUD4 166 aaPredicted RBP16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 HERVK_113Q902F9 699 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 C6orf50Q9HD87 102 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 REV3LO60673 3130 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 LOXHD1Q8IVV2 1947 aa16.9■□□□□ 0.3
RPUSD1-204ENST00000563560 MICAL3Q7RTP6 2002 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms