RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 RTEL1Q9NZ71 1219 aa24.2■■□□□ 1.46
CHD9-208ENST00000563410 MEIS2O14770 477 aa24.19■■□□□ 1.46
CHD9-208ENST00000563410 PRC1O43663 620 aa24.19■■□□□ 1.46
CHD9-208ENST00000563410 GTPBP6O43824 516 aaPredicted RBP24.19■■□□□ 1.46
CHD9-208ENST00000563410 ADAMTS19Q8TE59 1207 aa24.19■■□□□ 1.46
CHD9-208ENST00000563410 RRP36Q96EU6 259 aaKnown RBP24.19■■□□□ 1.46
CHD9-208ENST00000563410 C17orf102A2RUQ5 167 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 SH2B2O14492 632 aaPredicted RBP24.18■■□□□ 1.46
CHD9-208ENST00000563410 LPXNO60711 386 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 GJB5O95377 273 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 PLEKHA8P1O95397 391 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 SMIM10L2AP0DMW4 78 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 SMIM10L2BP0DMW5 78 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 KIF5BP33176 963 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 GRB10Q13322 594 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 NEDD9Q14511 834 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 CASC1Q6TDU7 716 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 METTL7BQ6UX53 244 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 CYFIP1Q7L576 1253 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 SRBD1Q8N5C6 995 aaKnown RBP24.18■■□□□ 1.46
CHD9-208ENST00000563410 GPR20Q99678 358 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 ZBED2Q9BTP6 218 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 TSPYL2Q9H2G4 693 aaPredicted RBP24.18■■□□□ 1.46
CHD9-208ENST00000563410 RNPEPQ9H4A4 650 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 TELO2Q9Y4R8 837 aa24.18■■□□□ 1.46
CHD9-208ENST00000563410 PIK3CDO00329 1044 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 FIBPO43427 364 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 EFCAB14O75071 495 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 LGR5O75473 907 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 MCM5P33992 734 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 TFF2Q03403 129 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 MKRN4PQ13434 485 aaPredicted RBP24.17■■□□□ 1.46
CHD9-208ENST00000563410 IKBKEQ14164 716 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 PCNX4Q63HM2 1172 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 SMARCC2Q8TAQ2 1214 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 ATP6V0A1Q93050 837 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 USP26Q9BXU7 913 aa24.17■■□□□ 1.46
CHD9-208ENST00000563410 RSPH10B2B2RC85 870 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 NOP56O00567 594 aaKnown RBP24.16■■□□□ 1.46
CHD9-208ENST00000563410 SLC27A2O14975 620 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 TREHO43280 583 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 RSPH10BP0C881 870 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 THPOP40225 353 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 CMTR1Q8N1G2 835 aaKnown RBP24.16■■□□□ 1.46
CHD9-208ENST00000563410 TMEM87BQ96K49 555 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 RAD9AQ99638 391 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 LZTS2Q9BRK4 669 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 ESYT1Q9BSJ8 1104 aa24.16■■□□□ 1.46
CHD9-208ENST00000563410 EMSYQ7Z589 1322 aa24.15■■□□□ 1.46
CHD9-208ENST00000563410 BMP1P13497 986 aa24.15■■□□□ 1.46
CHD9-208ENST00000563410 RXRAP19793 462 aa24.15■■□□□ 1.46
CHD9-208ENST00000563410 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.15■■□□□ 1.46
CHD9-208ENST00000563410 TMTC2Q8N394 836 aa24.15■■□□□ 1.46
CHD9-208ENST00000563410 DBF4BQ8NFT6 615 aa24.15■■□□□ 1.46
CHD9-208ENST00000563410 CUL5Q93034 780 aa24.15■■□□□ 1.46
CHD9-208ENST00000563410 UHRF1Q96T88 793 aaPredicted RBP24.15■■□□□ 1.46
CHD9-208ENST00000563410 SENP7Q9BQF6 1050 aa24.15■■□□□ 1.46
CHD9-208ENST00000563410 SEC63Q9UGP8 760 aaKnown RBP24.15■■□□□ 1.46
CHD9-208ENST00000563410 CCDC69A6NI79 296 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 LIFRP42702 1097 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 GNAQP50148 359 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 NECTIN1Q15223 517 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 SKIV2LQ15477 1246 aaKnown RBP24.14■■□□□ 1.45
CHD9-208ENST00000563410 CREB3L3Q68CJ9 461 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 XRRA1Q6P2D8 792 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 NFXL1Q6ZNB6 911 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 TRIM50Q86XT4 487 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 OSBPL7Q9BZF2 842 aa24.14■■□□□ 1.45
CHD9-208ENST00000563410 LINC01553A4QN01 128 aa24.13■■□□□ 1.45
CHD9-208ENST00000563410 ADAM17P78536 824 aa24.13■■□□□ 1.45
CHD9-208ENST00000563410 PLEKHG4Q58EX7 1191 aa24.13■■□□□ 1.45
CHD9-208ENST00000563410 FAM117BQ6P1L5 589 aa24.13■■□□□ 1.45
CHD9-208ENST00000563410 GDPD5Q8WTR4 605 aa24.13■■□□□ 1.45
CHD9-208ENST00000563410 SETD4Q9NVD3 440 aa24.13■■□□□ 1.45
CHD9-208ENST00000563410 KCNQ1P51787 676 aa24.12■■□□□ 1.45
CHD9-208ENST00000563410 ERVK-21P61565 698 aa24.12■■□□□ 1.45
CHD9-208ENST00000563410 RAB11FIP4Q86YS3 637 aa24.12■■□□□ 1.45
CHD9-208ENST00000563410 IL27Q8NEV9 243 aa24.12■■□□□ 1.45
CHD9-208ENST00000563410 LRRC2Q9BYS8 371 aa24.12■■□□□ 1.45
CHD9-208ENST00000563410 NLRC5Q86WI3 1866 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 hCG_1642624A0A1W2PR95 340 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 CALM1P0DP23 149 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 CALM2P0DP24 149 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 CALM3P0DP25 149 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 SP4Q02446 784 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 UTP14CQ5TAP6 766 aaKnown RBP24.11■■□□□ 1.45
CHD9-208ENST00000563410 NLRX1Q86UT6 975 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 TGS1Q96RS0 853 aaKnown RBP24.11■■□□□ 1.45
CHD9-208ENST00000563410 PSTPIP2Q9H939 334 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 SUGCTQ9HAC7 445 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 MTUS1Q9ULD2 1270 aa24.11■■□□□ 1.45
CHD9-208ENST00000563410 ATP9AO75110 1047 aa24.1■■□□□ 1.45
CHD9-208ENST00000563410 CAND2O75155 1236 aa24.1■■□□□ 1.45
CHD9-208ENST00000563410 CTSHP09668 335 aa24.1■■□□□ 1.45
CHD9-208ENST00000563410 KCNA2P16389 499 aa24.1■■□□□ 1.45
CHD9-208ENST00000563410 AAK1Q2M2I8 961 aa24.1■■□□□ 1.45
CHD9-208ENST00000563410 TMTC3Q6ZXV5 915 aa24.1■■□□□ 1.45
CHD9-208ENST00000563410 GPRASP2Q96D09 838 aa24.1■■□□□ 1.45
CHD9-208ENST00000563410 NECAB3Q96P71 396 aaPredicted RBP24.1■■□□□ 1.45
CHD9-208ENST00000563410 LMCD1Q9NZU5 365 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms