RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 TGFB3P10600 412 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CYP2C9P11712 490 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 METAP2P50579 478 aaKnown RBP eCLIP10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 NAPAP54920 295 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 AKAP17AQ02040 695 aaKnown RBP10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 GHRHRQ02643 423 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PTPN11Q06124 597 aaPredicted RBP10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 BFSP2Q13515 415 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PTGISQ16647 500 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SLC35G1Q2M3R5 365 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ADCK5Q3MIX3 580 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 USP17L6PQ6QN14 398 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 NLRX1Q86UT6 975 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PPTC7Q8NI37 304 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PPP1R13LQ8WUF5 828 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ALG1Q9BT22 464 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 IL23AQ9NPF7 189 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 RTEL1Q9NZ71 1219 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ZBBXA8MT70 800 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 FIBPO43427 364 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ZNF286BP0CG31 522 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 EPHB4P54760 987 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SMAD3P84022 425 aaKnown RBP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 EXOSC10Q01780 885 aaKnown RBP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 NEDD9Q14511 834 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CELF3Q5SZQ8 465 aaKnown RBP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 XRRA1Q6P2D8 792 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 Q6ZUG5 572 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 IL31RAQ8NI17 732 aa10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 GPKOWQ92917 476 aaPredicted RBP eCLIP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 EMID1Q96A84 441 aaPredicted RBP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 NOC4LQ9BVI4 516 aaKnown RBP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 FTOQ9C0B1 505 aaKnown RBP eCLIP10.67□□□□□ -0.7
CHRFAM7A-204ENST00000562729 MYH7BA7E2Y1 1941 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 UMODL1Q5DID0 1318 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PIK3CDO00329 1044 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PPFIA4O75335 1185 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ACTN1P12814 892 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CPA1P15085 419 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 UBA1P22314 1058 aaKnown RBP10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 HSPA4P34932 840 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ADCY7P51828 1080 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PTPN5P54829 565 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SP4Q02446 784 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 APOBRQ0VD83 1088 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 MFSD10Q14728 455 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 UBE2SQ16763 222 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 KIAA0753Q2KHM9 967 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 MYSM1Q5VVJ2 828 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PCNX4Q63HM2 1172 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ZNF365Q70YC5 407 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 OTOP2Q7RTS6 562 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 DEFB128Q7Z7B8 93 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 GIMAP8Q8ND71 665 aaPredicted RBP10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 BRF1Q92994 677 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SCLYQ96I15 445 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CDHR1Q96JP9 859 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 BRPF3Q9ULD4 1205 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SNX14Q9Y5W7 946 aa10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SZT2Q5T011 3432 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 LAMA3Q16787 3333 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 hCG_1984214I3L0E3 225 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 MEIS2O14770 477 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PFKMP08237 780 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 RFC2P35250 354 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ZNF76P36508 570 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 MTMR1Q13613 665 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 COL9A3Q14050 684 aaPredicted RBP10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 HSDL1Q3SXM5 330 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 TMEM240Q5SV17 173 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ERICH6BQ5W0A0 696 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 FAM109BQ6ICB4 259 aaPredicted RBP10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PPP1R18Q6NYC8 613 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CYFIP1Q7L576 1253 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ZNF713Q8N859 430 aaPredicted RBP10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CCDC12Q8WUD4 166 aaPredicted RBP10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SLC4A5Q9BY07 1137 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 GLT8D2Q9H1C3 349 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PKD2L1Q9P0L9 805 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 MSRAQ9UJ68 235 aa10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ZNF215Q9UL58 517 aaPredicted RBP10.65□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CNTNAP5Q8WYK1 1306 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 SMCO2A6NFE2 343 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 SPATA31C2B4DYI2 1134 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 RGS20O76081 388 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 F2P00734 622 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 RPS6KB1P23443 525 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 RCAN1P53805 252 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 MRPS9P82933 396 aaKnown RBP10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 SP2Q02086 613 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 UTP14CQ5TAP6 766 aaKnown RBP10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 WWC2Q6AWC2 1192 aa10.64□□□□□ -0.71
CHRFAM7A-204ENST00000562729 GDF6Q6KF10 455 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms